RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 GREB1Q4ZG55 1949 aa20.14■□□□□ 0.81
SPSB3-204ENST00000563741 M0QYT0 321 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 PRPSAP2O60256 369 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 ENDOD1O94919 500 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 HMGA1P17096 107 aaKnown RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 CKAP4Q07065 602 aaKnown RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 CCDC181Q5TID7 509 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 BTBD8Q5XKL5 378 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 ARHGAP18Q8N392 663 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 ACTRT1Q8TDG2 376 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 DQX1Q8TE96 717 aaKnown RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 CASP10Q92851 521 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 PGAP3Q96FM1 320 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 RNF14Q9UBS8 474 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 TTC7AQ9ULT0 858 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 MAGED2Q9UNF1 606 aaPredicted RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 PGRMC1O00264 195 aaKnown RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 GLUD1P00367 558 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 KRT1P04264 644 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 CSH1P0DML2 217 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 CSH2P0DML3 217 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 RDXP35241 583 aaKnown RBP20.13■□□□□ 0.81
SPSB3-204ENST00000563741 CLCN4P51793 760 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 SCYL2Q6P3W7 929 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 TAC4Q86UU9 113 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 EXD1Q8NHP7 514 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 MYRFLQ96LU7 910 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 PIGVQ9NUD9 493 aa20.13■□□□□ 0.81
SPSB3-204ENST00000563741 SLU7O95391 586 aaKnown RBP20.12■□□□□ 0.81
SPSB3-204ENST00000563741 IGLV3-25P01717 112 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 FGGP02679 453 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 ZDHHC11BP0C7U3 371 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 RARAP10276 462 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 NME3Q13232 169 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 SMAD4Q13485 552 aaKnown RBP20.12■□□□□ 0.81
SPSB3-204ENST00000563741 VEPH1Q14D04 833 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 SEL1L2Q5TEA6 688 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 ANKRD54Q6NXT1 300 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 ZNF572Q7Z3I7 529 aaPredicted RBP20.12■□□□□ 0.81
SPSB3-204ENST00000563741 FAM131BQ86XD5 332 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 CEP112Q8N8E3 955 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 KREMEN2Q8NCW0 462 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 SLC22A17Q8WUG5 538 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 RAPGEF5Q92565 580 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 SLITRK1Q96PX8 696 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 UHRF1Q96T88 793 aaPredicted RBP20.12■□□□□ 0.81
SPSB3-204ENST00000563741 SMOC2Q9H3U7 446 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 FAM204AQ9H8W3 233 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 TLR8Q9NR97 1041 aaKnown RBP20.12■□□□□ 0.81
SPSB3-204ENST00000563741 DDIT4Q9NX09 232 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 DDX56Q9NY93 547 aaKnown RBP20.12■□□□□ 0.81
SPSB3-204ENST00000563741 CLIC5Q9NZA1 410 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 HCFC2Q9Y5Z7 792 aa20.12■□□□□ 0.81
SPSB3-204ENST00000563741 SYNJ2BP-COX16A0A087WUM0 186 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 PI4K2BG5E9Z4 385 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 MBTPS2O43462 519 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 ZRANB2O95218 330 aaKnown RBP eCLIP20.11■□□□□ 0.81
SPSB3-204ENST00000563741 PAFAH1B1P43034 410 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 PSEN1P49768 467 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 DEUP1Q05D60 604 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 ANKS1BQ7Z6G8 1248 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 PSMG2Q969U7 264 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 TRMT2BQ96GJ1 504 aaKnown RBP20.11■□□□□ 0.81
SPSB3-204ENST00000563741 SNRNP25Q9BV90 132 aaKnown RBP20.11■□□□□ 0.81
SPSB3-204ENST00000563741 WDR6Q9NNW5 1121 aaKnown RBP20.11■□□□□ 0.81
SPSB3-204ENST00000563741 COX16Q9P0S2 106 aa20.11■□□□□ 0.81
SPSB3-204ENST00000563741 ZNF638Q14966 1978 aaKnown RBP20.11■□□□□ 0.81
SPSB3-204ENST00000563741 LRRD1A4D1F6 860 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 C3orf70A6NLC5 250 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 C8AP07357 584 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 IL9P15248 144 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 HOXB8P17481 243 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 EPHB3P54753 998 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 PLD1Q13393 1074 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 ZFYVE27Q5T4F4 411 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 MSANTD2Q6P1R3 559 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 CCDC149Q6ZUS6 474 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 CCDC185Q8N715 623 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 SMRP1Q8NCR6 262 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 MNS1Q8NEH6 495 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 CMASQ8NFW8 434 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 TEKT4Q8WW24 435 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 HSPH1Q92598 858 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 RNF25Q96BH1 459 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 RBM41Q96IZ5 413 aaKnown RBP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 NUDT5Q9UKK9 219 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 MDM4O15151 490 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 EIF4EBP2Q13542 120 aaPredicted RBP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 BOLA3Q53S33 107 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 MFSD7Q6UXD7 560 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 RSRC2Q7L4I2 434 aaKnown RBP20.1■□□□□ 0.81
SPSB3-204ENST00000563741 CCDC50Q8IVM0 306 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 RCOR2Q8IZ40 523 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 RNF139Q8WU17 664 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 OVCA2Q8WZ82 227 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 HERPUD2Q9BSE4 406 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 DZANK1Q9NVP4 752 aa20.1■□□□□ 0.81
SPSB3-204ENST00000563741 GPATCH2LQ9NWQ4 482 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms