RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 FAM83AQ86UY5 434 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 TMEM192Q8IY95 271 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 FAM172AQ8WUF8 416 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 RNF157Q96PX1 679 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 CNPY3Q9BT09 278 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 C20orf27Q9GZN8 174 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 MAN1C1Q9NR34 630 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 RHBDL2Q9NX52 303 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 WDR27A2RRH5 827 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 E9PBE3 544 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 KLHL41O60662 606 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 TYK2P29597 1187 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 PTPN7P35236 360 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 TCF7P36402 384 aaPredicted RBP12.22□□□□□ -0.45
ABCA3-203ENST00000563623 LAMTOR4Q0VGL1 99 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 SURF1Q15526 300 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 SAMD7Q7Z3H4 446 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 NIPA2Q8N8Q9 360 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 PIP4K2CQ8TBX8 421 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 GDPD5Q8WTR4 605 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 PIWIL1Q96J94 861 aaKnown RBP12.22□□□□□ -0.45
ABCA3-203ENST00000563623 TEX13BQ9BXU2 312 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 MYOZ2Q9NPC6 264 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 CNTN6Q9UQ52 1028 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 STYXL1Q9Y6J8 313 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 SLX4Q8IY92 1834 aa12.22□□□□□ -0.45
ABCA3-203ENST00000563623 TCRBV5S1A1TA0A578 114 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 AIM2O14862 343 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 CHADO15335 359 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 ZNF189O75820 626 aaPredicted RBP12.21□□□□□ -0.45
ABCA3-203ENST00000563623 DGKIO75912 1065 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 PGM3O95394 542 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 NFICP08651 508 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 PAX3P23760 479 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 CA8P35219 290 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 ASPAP45381 313 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 SLC1A6P48664 564 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 EFNA5P52803 228 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 TNFAIP1Q13829 316 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 KCNJ11Q14654 390 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 TMEM132BQ14DG7 1078 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 FOXB2Q5VYV0 432 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 NXNQ6DKJ4 435 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 NCAPG2Q86XI2 1143 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 APLFQ8IW19 511 aaPredicted RBP12.21□□□□□ -0.45
ABCA3-203ENST00000563623 PLD5Q8N7P1 536 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 CDKL2Q92772 493 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 PPP2R3CQ969Q6 453 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 THAP1Q9NVV9 213 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 EFR3BQ9Y2G0 817 aa12.21□□□□□ -0.45
ABCA3-203ENST00000563623 GOLGA8QA0A0J9YX86 632 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 GOLGA8OA6NCC3 632 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 GOLGA8NF8WBI6 632 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 DCXO43602 365 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 TRPA1O75762 1119 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 EGFRP00533 1210 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 MSX2P35548 267 aaPredicted RBP12.21□□□□□ -0.46
ABCA3-203ENST00000563623 CLCN3P51790 818 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 ACTR3P61158 418 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 MRPS5P82675 430 aaKnown RBP12.21□□□□□ -0.46
ABCA3-203ENST00000563623 CXCL9Q07325 125 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 SCUBE3Q8IX30 993 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 RNF168Q8IYW5 571 aaPredicted RBP12.21□□□□□ -0.46
ABCA3-203ENST00000563623 NME8Q8N427 588 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 C12orf29Q8N999 325 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 FLAD1Q8NFF5 587 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 CMASQ8NFW8 434 aaPredicted RBP12.21□□□□□ -0.46
ABCA3-203ENST00000563623 OR6Y1Q8NGX8 325 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 GSDMBQ8TAX9 411 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 PGBD4Q96DM1 585 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 TMEM176AQ96HP8 235 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 C7orf26Q96N11 449 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 TRAPPC9Q96Q05 1148 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 GCNAQ96QF7 691 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.46
ABCA3-203ENST00000563623 CCDC78A2IDD5 438 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 SPATA31C2B4DYI2 1134 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 RFPL1O75677 317 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 HSPA4LO95757 839 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 ITGA9Q13797 1035 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 CA9Q16790 459 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 SLC5A9Q2M3M2 681 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 HEATR6Q6AI08 1181 aaKnown RBP12.2□□□□□ -0.46
ABCA3-203ENST00000563623 ACO2Q99798 780 aaKnown RBP12.2□□□□□ -0.46
ABCA3-203ENST00000563623 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 POPDC2Q9HBU9 364 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 ARHGEF4Q9NR80 690 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 PCDHGC3Q9UN70 934 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 ASB3Q9Y575 518 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 ATP6V1B1P15313 513 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 RAG1P15918 1043 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 FAM183BPQ6ZVS7 135 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 HPS6Q86YV9 775 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 HACE1Q8IYU2 909 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 RNF148Q8N7C7 305 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 PIWIL2Q8TC59 973 aaKnown RBP12.2□□□□□ -0.46
ABCA3-203ENST00000563623 AGAP3Q96P47 875 aa12.2□□□□□ -0.46
ABCA3-203ENST00000563623 RNF19AQ9NV58 838 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms