RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SLC6A3Q01959 620 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 TLE1Q04724 770 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 PRICKLE4Q2TBC4 344 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 BTBD8Q5XKL5 378 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 PLPPR4Q7Z2D5 763 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 PCSK9Q8NBP7 692 aaKnown RBP5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 LINS1Q8NG48 757 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 DEPDC1BQ8WUY9 529 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 TRIM44Q96DX7 344 aaPredicted RBP5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 SIPA1Q96FS4 1042 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 PERPQ96FX8 193 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 TMX3Q96JJ7 454 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 WDR24Q96S15 920 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 APOL6Q9BWW8 343 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 KLHL4Q9C0H6 718 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 AP5M1Q9H0R1 490 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 TP63Q9H3D4 680 aaPredicted RBP5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 MUC13Q9H3R2 512 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 ST6GALNAC4Q9H4F1 302 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 SLC6A20Q9NP91 592 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 G6PC2Q9NQR9 355 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 MARCH2Q9P0N8 246 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 CGNQ9P2M7 1197 aaKnown RBP5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 ADGRE2Q9UHX3 823 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 MID2Q9UJV3 735 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 ANAPC5Q9UJX4 755 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 TBC1D30Q9Y2I9 924 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 LYVE1Q9Y5Y7 322 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 PLCH1Q4KWH8 1693 aa5.55□□□□□ -1.52
VPS35P1-201ENST00000563400 RGSL1A5PLK6 1076 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 NPIPB15A6NHN6 443 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 KIAA1324LA8MWY0 1029 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 AKR1B15C9JRZ8 316 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 K7EPI3 171 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 SLC27A2O14975 620 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 SGSM2O43147 1006 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 ZBTB43O43298 467 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 ZNF205O95201 554 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 SNX4O95219 450 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 GGPS1O95749 300 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 FTCDO95954 541 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 CCDC159P0C7I6 412 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 RARGP13631 454 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 PBLDP30039 288 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 PRDX5P30044 214 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 TKTL1P51854 596 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 HERVK_113P62684 666 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 TEKQ02763 1124 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 CAMK2DQ13557 499 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 MED22Q15528 200 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 TXNRD1Q16881 649 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 MAJINQ3KP22 176 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 DEPDC1Q5TB30 811 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 KIF6Q6ZMV9 814 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 ZAR1Q86SH2 424 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 RSPH3Q86UC2 560 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 LINC00346Q8IVM7 164 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 TDRD5Q8NAT2 981 aaKnown RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 OR6J1Q8NGC5 347 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 ETNPPLQ8TBG4 499 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 IFI44Q8TCB0 444 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 BCL7CQ8WUZ0 217 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 LMO7Q8WWI1 1683 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 MAP6Q96JE9 813 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 ALPK1Q96QP1 1244 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 PLEKHF1Q96S99 279 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 ATP6V0BQ99437 205 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 CITED2Q99967 270 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 LBHD1Q9BQE6 289 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 VPS16Q9H269 839 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 RANBP17Q9H2T7 1088 aaKnown RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 SEMA6CQ9H3T2 930 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 EPB41L1Q9H4G0 881 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 GSX1Q9H4S2 264 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 ACSS3Q9H6R3 686 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 HYPKQ9NX55 129 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 GULP1Q9UBP9 304 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 DBF4Q9UBU7 674 aaPredicted RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 PARP4Q9UKK3 1724 aaKnown RBP5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 CCL27Q9Y4X3 112 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 DISP2A7MBM2 1401 aa5.54□□□□□ -1.52
VPS35P1-201ENST00000563400 PRAMEF22A3QJZ6 481 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 A4D1N5 150 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 PRR19A6NJB7 356 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 KCNQ3O43525 872 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 ZBTB14O43829 449 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 PRPSAP2O60256 369 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 PPP6R2O75170 966 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 METTL18O95568 372 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 F13BP05160 661 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 TXNP10599 105 aaKnown RBP5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 RPS2P15880 293 aaKnown RBP5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 PTPN2P17706 415 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 NFKBIAP25963 317 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 IL1R2P27930 398 aa5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 EEF1DP29692 281 aaKnown RBP5.53□□□□□ -1.52
VPS35P1-201ENST00000563400 GP5P40197 560 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms