RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 TULP3O75386 442 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 FYNP06241 537 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 TPM2P07951 284 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 SEC13P55735 322 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 PDCLQ13371 301 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 TRIP4Q15650 581 aaPredicted RBP29.57■■■□□ 2.32
NME3-203ENST00000563367 MSANTD2Q6P1R3 559 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 APTXQ7Z2E3 356 aaKnown RBP29.57■■■□□ 2.32
NME3-203ENST00000563367 DENND1CQ8IV53 801 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 PLD4Q96BZ4 506 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 BBS2Q9BXC9 721 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 FAM126AQ9BYI3 521 aaPredicted RBP29.57■■■□□ 2.32
NME3-203ENST00000563367 DCLK3Q9C098 648 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 ARHGEF4Q9NR80 690 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 MARK1Q9P0L2 795 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 ZNF510Q9Y2H8 683 aa29.57■■■□□ 2.32
NME3-203ENST00000563367 PRR23AA6NEV1 266 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 NEDD8-MDP1E9PL57 170 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 TRIM24O15164 1050 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 PAPSS1O43252 624 aaPredicted RBP29.56■■■□□ 2.32
NME3-203ENST00000563367 GFRA3O60609 400 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 ATG13O75143 517 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 KAT7O95251 611 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 FKBP15Q5T1M5 1219 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 ATRIPQ8WXE1 791 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 STK33Q9BYT3 514 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 LHX5Q9H2C1 402 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 SIK3Q9Y2K2 1263 aa29.56■■■□□ 2.32
NME3-203ENST00000563367 HBS1LQ9Y450 684 aaKnown RBP29.56■■■□□ 2.32
NME3-203ENST00000563367 EML5Q05BV3 1969 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 A0A0A0MRY4 1105 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 LRRC10BA6NIK2 292 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 PALM2-AKAP2B1ALY0 433 aaPredicted RBP29.55■■■□□ 2.32
NME3-203ENST00000563367 LILRB5O75023 590 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 APODP05090 189 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 TYRP14679 529 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 CDK11BP21127 795 aaKnown RBP29.55■■■□□ 2.32
NME3-203ENST00000563367 KLHL40Q2TBA0 621 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 USP33Q8TEY7 942 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 CPXM1Q96SM3 734 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 FUCA2Q9BTY2 467 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 NAT10Q9H0A0 1025 aaKnown RBP29.55■■■□□ 2.32
NME3-203ENST00000563367 WDR35Q9P2L0 1181 aa29.55■■■□□ 2.32
NME3-203ENST00000563367 LGALS16A8MUM7 142 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 EPHB6O15197 1021 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 CHRM1P11229 460 aaPredicted RBP29.54■■■□□ 2.32
NME3-203ENST00000563367 ATP1A3P13637 1013 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 GRIA2P42262 883 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 FNTBP49356 437 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 NRLP54845 237 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 C2orf27AQ580R0 203 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 DHX40Q8IX18 779 aaKnown RBP29.54■■■□□ 2.32
NME3-203ENST00000563367 ANKRD20A12PQ8NF67 263 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 GOLGA1Q92805 767 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 BHMTQ93088 406 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 BPIFA3Q9BQP9 254 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 SEMA4AQ9H3S1 761 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 FAM207AQ9NSI2 230 aaPredicted RBP29.54■■■□□ 2.32
NME3-203ENST00000563367 PLK2Q9NYY3 685 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 DEC1Q9P2X7 70 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 NAALADL1Q9UQQ1 740 aa29.54■■■□□ 2.32
NME3-203ENST00000563367 RIF1Q5UIP0 2472 aaKnown RBP29.53■■■□□ 2.32
NME3-203ENST00000563367 F8VZ95 297 aa29.53■■■□□ 2.32
NME3-203ENST00000563367 CACNG3O60359 315 aa29.53■■■□□ 2.32
NME3-203ENST00000563367 NCAM1P13591 858 aa29.53■■■□□ 2.32
NME3-203ENST00000563367 KRT9P35527 623 aa29.53■■■□□ 2.32
NME3-203ENST00000563367 BPIFB4P59827 614 aa29.53■■■□□ 2.32
NME3-203ENST00000563367 HEATR6Q6AI08 1181 aaKnown RBP29.53■■■□□ 2.32
NME3-203ENST00000563367 C1orf131Q8NDD1 294 aaKnown RBP29.53■■■□□ 2.32
NME3-203ENST00000563367 FAM149B1Q96BN6 582 aa29.53■■■□□ 2.32
NME3-203ENST00000563367 PIWIL1Q96J94 861 aaKnown RBP29.53■■■□□ 2.32
NME3-203ENST00000563367 SART1O43290 800 aaKnown RBP29.52■■■□□ 2.32
NME3-203ENST00000563367 CYP11B1P15538 503 aa29.52■■■□□ 2.32
NME3-203ENST00000563367 CHKAP35790 457 aa29.52■■■□□ 2.32
NME3-203ENST00000563367 POLR2FP61218 127 aaKnown RBP29.52■■■□□ 2.32
NME3-203ENST00000563367 SYCP1Q15431 976 aa29.52■■■□□ 2.32
NME3-203ENST00000563367 EMC10Q5UCC4 262 aa29.52■■■□□ 2.32
NME3-203ENST00000563367 FAM217AQ8IXS0 508 aa29.52■■■□□ 2.32
NME3-203ENST00000563367 PPP1R13BQ96KQ4 1090 aa29.52■■■□□ 2.32
NME3-203ENST00000563367 DNAJC17Q9NVM6 304 aaKnown RBP29.52■■■□□ 2.32
NME3-203ENST00000563367 SLC8A2Q9UPR5 921 aa29.52■■■□□ 2.32
NME3-203ENST00000563367 WDR87Q6ZQQ6 2873 aa29.51■■■□□ 2.32
NME3-203ENST00000563367 FAM186AA6NE01 2351 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 IGLV3-27P01718 113 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 HOXA6P31267 233 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 TNFRSF4P43489 277 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 HARS2P49590 506 aaKnown RBP29.51■■■□□ 2.31
NME3-203ENST00000563367 TAF5Q15542 800 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 SYPL2Q5VXT5 272 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 SYT13Q7L8C5 426 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 CCDC26Q8TAB7 109 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 DQX1Q8TE96 717 aaKnown RBP29.51■■■□□ 2.31
NME3-203ENST00000563367 DDX1Q92499 740 aaKnown RBP29.51■■■□□ 2.31
NME3-203ENST00000563367 XPO6Q96QU8 1125 aaKnown RBP29.51■■■□□ 2.31
NME3-203ENST00000563367 NLRC4Q9NPP4 1024 aa29.51■■■□□ 2.31
NME3-203ENST00000563367 SYCE3A1L190 88 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 TBC1D3BA6NDS4 549 aa29.5■■■□□ 2.31
NME3-203ENST00000563367 PENKP01210 267 aaPredicted RBP29.5■■■□□ 2.31
NME3-203ENST00000563367 LMNAP02545 664 aaKnown RBP29.5■■■□□ 2.31
NME3-203ENST00000563367 KIR2DL1P43626 348 aaPredicted RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms