RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 NKX1-2Q9UD57 310 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 QSOX1O00391 747 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 SYT5O00445 386 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ZNF213O14771 459 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 PIP5K1BO14986 540 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 NPC1O15118 1278 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 WDR47O94967 919 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ITGA5P08648 1049 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 NPSP0C0P6 89 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 EBLN1P0CF75 366 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 MYCLP12524 364 aaPredicted RBP3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 NPPBP16860 134 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 YY1P25490 414 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 CYP2C18P33260 490 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 CCT8P50990 548 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 EEFSECP57772 596 aaKnown RBP3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 MTAPQ13126 283 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 POSTNQ15063 836 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ZACNQ401N2 412 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ARHGAP15Q53QZ3 475 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 WDR78Q5VTH9 848 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 CCDC70Q6NSX1 233 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 TLDC1Q6P9B6 456 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 DPY19L3Q6ZPD9 716 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ZNF788Q6ZQV5 615 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 PTCHD4Q6ZW05 846 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ZNF804AQ7Z570 1209 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 FSTL5Q8N475 847 aaPredicted RBP3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 SIRT6Q8N6T7 355 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 C11orf44Q8N8P7 122 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ABHD11Q8NFV4 315 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 FAM71BQ8TC56 605 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 STYXQ8WUJ0 223 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 EID2BQ96D98 161 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 LENG8Q96PV6 779 aaPredicted RBP3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 PAGR1Q9BTK6 254 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 MAGEH1Q9H213 219 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 DACT1Q9NYF0 836 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 AMFRQ9UKV5 643 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ADAMTS5Q9UNA0 930 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 ST3GAL5Q9UNP4 418 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 GPR52Q9Y2T5 361 aa3.77□□□□□ -1.81
SHCBP1-202ENST00000563219 DNAJC9-AS1A6NH13 148 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 CGB1A6NKQ9 187 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 AP4M1O00189 453 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 PCDH17O14917 1159 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 TMPRSS11DO60235 418 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 VIPP01282 170 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 PYGLP06737 847 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 ENGP17813 658 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 GPD1P21695 349 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 ADRA1DP25100 572 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 ABCG1P45844 678 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 PROK1P58294 105 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 EIF4A1P60842 406 aaKnown RBP3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 SRSF4Q08170 494 aaKnown RBP3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 FOXO1Q12778 655 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 PRKG1Q13976 671 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 RASGRP3Q8IV61 690 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 SFTPA1Q8IWL2 248 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 CACNA2D3Q8IZS8 1091 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 SARAFQ96BY9 339 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 GRAMD1AQ96CP6 724 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 RMDN3Q96TC7 470 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 CPNE5Q9HCH3 593 aa3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 AGO4Q9HCK5 861 aaKnown RBP3.76□□□□□ -1.81
SHCBP1-202ENST00000563219 ACKR2O00590 384 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 ZSCAN9O15535 394 aaPredicted RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 USP1O94782 785 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 TMEM225BP0DP42 221 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 GYS1P13807 737 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 CREB1P16220 341 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 CNTFP26441 200 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 MCM5P33992 734 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 SERPINF1P36955 418 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 CCT5P48643 541 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 DIO1P49895 249 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 DGKQP52824 942 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 PSG6Q00889 435 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 KCNJ12Q14500 433 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 FAM153CQ494X1 144 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 AASDHQ4L235 1098 aaPredicted RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 PCID2Q5JVF3 399 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 L1TD1Q5T7N2 865 aaKnown RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 TSTD2Q5T7W7 516 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 FAM90A2PQ658T7 463 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 DENND2CQ68D51 928 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 GRHL2Q6ISB3 625 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 JMJD6Q6NYC1 403 aaPredicted RBP3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 CEP85Q6P2H3 762 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 LVRNQ6Q4G3 990 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 MMS22LQ6ZRQ5 1243 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 PTF1AQ7RTS3 328 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 GATAD2AQ86YP4 633 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 RASAL3Q86YV0 1011 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 PNPLA1Q8N8W4 532 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 RUBCNQ92622 972 aa3.75□□□□□ -1.81
SHCBP1-202ENST00000563219 RSC1A1Q92681 617 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms