RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 NUP93Q8N1F7 819 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 SLC39A11Q8N1S5 342 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 ATAD1Q8NBU5 361 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 SLC7A14Q8TBB6 771 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 FBXO25Q8TCJ0 367 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 PIK3R5Q8WYR1 880 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 P3H4Q92791 437 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 B3GALT6Q96L58 329 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 CCDC114Q96M63 670 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 CSPG4P5Q96PW8 444 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 FMO2Q99518 471 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 VN1R3Q9BXE9 311 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 TSPYL1Q9H0U9 437 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 FBXO44Q9H4M3 255 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 DHX35Q9H5Z1 703 aaKnown RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 PCDH9Q9HC56 1237 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 IL23AQ9NPF7 189 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 ABI2Q9NYB9 513 aaPredicted RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 CWC15Q9P013 229 aaKnown RBP9.9□□□□□ -0.82
CDH13-205ENST00000562307 MTRRQ9UBK8 725 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 LTBP2Q14767 1821 aa9.9□□□□□ -0.82
CDH13-205ENST00000562307 NDC80O14777 642 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 MCF2LO15068 1137 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 RBP3P10745 1247 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 ATF2P15336 505 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 ADCY8P40145 1251 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 PBX3P40426 434 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 EIF3EP60228 445 aaKnown RBP9.89□□□□□ -0.83
CDH13-205ENST00000562307 DEFB103AP81534 67 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 CALCOCO2Q13137 446 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 GPS2Q13227 327 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 XRCC4Q13426 336 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 MTMR3Q13615 1198 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 DDR2Q16832 855 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 KCTD19Q17RG1 926 aaPredicted RBP9.89□□□□□ -0.83
CDH13-205ENST00000562307 MSANTD2Q6P1R3 559 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 LRIG3Q6UXM1 1119 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 RNF19BQ6ZMZ0 732 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 GSTA5Q7RTV2 222 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 ARHGAP18Q8N392 663 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.89□□□□□ -0.83
CDH13-205ENST00000562307 DQX1Q8TE96 717 aaKnown RBP9.89□□□□□ -0.83
CDH13-205ENST00000562307 EDEM1Q92611 657 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 HAUS1Q96CS2 278 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 RTP4Q96DX8 246 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 ZNF558Q96NG5 402 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 MAGEB5Q9BZ81 275 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 FOXP3Q9BZS1 431 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 OSBPL2Q9H1P3 480 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 MED4Q9NPJ6 270 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 DDIT4Q9NX09 232 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 HSFX1Q9UBD0 423 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 SAE1Q9UBE0 346 aaPredicted RBP9.89□□□□□ -0.83
CDH13-205ENST00000562307 MTRF1LQ9UGC7 380 aaKnown RBP9.89□□□□□ -0.83
CDH13-205ENST00000562307 ASIC3Q9UHC3 531 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 PATJQ8NI35 1801 aa9.89□□□□□ -0.83
CDH13-205ENST00000562307 VWA8A3KMH1 1905 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 BCLAF3A2AJT9 711 aaKnown RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 CFAP69A5D8W1 941 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 GOLGA6BA6NDN3 693 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 SPDYE4A6NLX3 237 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 H0YGN5 161 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 H3BRJ5 948 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 I6L893 689 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 DNALI1O14645 258 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 IRAK2O43187 625 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 RTN3O95197 1032 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 SYF2O95926 243 aaKnown RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 SOD2P04179 222 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 CPB1P15086 417 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 LAG3P18627 525 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 HSD17B3P37058 310 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 ARL4AP40617 200 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 ITGA8P53708 1063 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 RPL10AP62906 217 aaKnown RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 DSG1Q02413 1049 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 DHX9Q08211 1270 aaKnown RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 CBLBQ13191 982 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 NME3Q13232 169 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 DPYSQ14117 519 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 SLMAPQ14BN4 828 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 PAFAH1B3Q15102 231 aaKnown RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 TRIP13Q15645 432 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 UAP1Q16222 522 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 ARL13BQ3SXY8 428 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 PPP6R3Q5H9R7 873 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 EFHC2Q5JST6 749 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 BRMS1LQ5PSV4 323 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 CFAP58Q5T655 872 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 BTBD8Q5XKL5 378 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 HIBCHQ6NVY1 386 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 PRSS55Q6UWB4 352 aaPredicted RBP9.88□□□□□ -0.83
CDH13-205ENST00000562307 NPNTQ6UXI9 565 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 C16orf59Q7L2K0 433 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 TAC4Q86UU9 113 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 RELL1Q8IUW5 271 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 UNC45BQ8IWX7 931 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 PYROXD2Q8N2H3 581 aa9.88□□□□□ -0.83
CDH13-205ENST00000562307 ZNF276Q8N554 614 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms