RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 L1CAMP32004 1257 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 LHX1P48742 406 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 VPS41P49754 854 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CCNG1P51959 295 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CDH6P55285 790 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 DYNLT1P63172 113 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 MRPS5P82675 430 aaKnown RBP10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 DSC1Q08554 894 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 ADIGQ0VDE8 80 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 TUSC3Q13454 348 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 SLC29A2Q14542 456 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 NOMO1Q15155 1222 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 TCTN1Q2MV58 587 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 BOLA3Q53S33 107 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 RNASEH2BQ5TBB1 312 aaKnown RBP10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 IZUMO3Q5VZ72 239 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 SLC9A4Q6AI14 798 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 HFE2Q6ZVN8 426 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 VSIG1Q86XK7 387 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 UNC45BQ8IWX7 931 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CCDC89Q8N998 374 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CCDC63Q8NA47 563 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 KCTD6Q8NC69 237 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 PCDH19Q8TAB3 1148 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 TLCD1Q96CP7 247 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 GLT1D1Q96MS3 346 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 TSC22D3Q99576 134 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 EPAS1Q99814 870 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CDC42EP4Q9H3Q1 356 aaKnown RBP10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 PCDH9Q9HC56 1237 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CSNK1G1Q9HCP0 422 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 NGRNQ9NPE2 291 aaKnown RBP10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CDH9Q9ULB4 789 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 L3MBTL1Q9Y468 752 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 FARP1Q9Y4F1 1045 aaPredicted RBP10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 PTCH2Q9Y6C5 1203 aa10.63□□□□□ -0.71
TUBGCP4-202ENST00000561691 CCT8L1PA6NM43 557 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 PDLIM1O00151 329 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ARVCFO00192 962 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 PRPSAP2O60256 369 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 DAB1O75553 588 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 DDHD2O94830 711 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 DRD4P21917 467 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ADCY8P40145 1251 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 DPYSL2Q16555 572 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 P3H1Q32P28 736 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZFYVE27Q5T4F4 411 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ARHGAP22Q7Z5H3 698 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CTU1Q7Z7A3 348 aaKnown RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 LRRTM3Q86VH5 581 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 DEFB106AQ8N104 65 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CCDC185Q8N715 623 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 OR10T2Q8NGX3 314 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 SPATA18Q8TC71 538 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 TMEM209Q96SK2 561 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 KCNK16Q96T55 309 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 NPY6RQ99463 290 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 RHOBTB2Q9BYZ6 727 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 USP29Q9HBJ7 922 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 KRT82Q9NSB4 513 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 MTRF1LQ9UGC7 380 aaKnown RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ANAPC5Q9UJX4 755 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZNF148Q9UQR1 794 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 I6L893 689 aaPredicted RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 DIAPH2O60879 1101 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 NBNO60934 754 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 FKTNO75072 461 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 AMHP03971 560 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 GRK4P32298 578 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 MATKP42679 507 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CTCFP49711 727 aaPredicted RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 NRLP54845 237 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 MAP3K7CLP57077 242 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 SNX16P57768 344 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CAV1Q03135 178 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 LMNB2Q03252 620 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CALCOCO2Q13137 446 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 PDK2Q15119 407 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CCDC38Q502W7 563 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 PAN2Q504Q3 1202 aaKnown RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 AGBL2Q5U5Z8 902 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 SYPL2Q5VXT5 272 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 DSTYKQ6XUX3 929 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZNF365Q70YC5 407 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 TRMT10CQ7L0Y3 403 aaKnown RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 STRADAQ7RTN6 431 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZNF280BQ86YH2 543 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CRIPAKQ8N1N5 446 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ZCCHC9Q8N567 271 aaKnown RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 FAM81AQ8TBF8 368 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 PGBD4Q96DM1 585 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 ANKRD27Q96NW4 1050 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 KCTD15Q96SI1 283 aaPredicted RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 WDR83Q9BRX9 315 aaKnown RBP10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 CALN1Q9BXU9 219 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 UBN1Q9NPG3 1134 aa10.62□□□□□ -0.71
TUBGCP4-202ENST00000561691 NINJ2Q9NZG7 142 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms