RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 CYP26A1O43174 497 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 CILPO75339 1184 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 TRIM16O95361 564 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 TBX18O95935 607 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 IGLV3-19P01714 112 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 HLA-DRAP01903 254 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 NR3C1P04150 777 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 FAM200BP0CF97 657 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 ZSCAN22P10073 491 aaPredicted RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 CD59P13987 128 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 TYRP14679 529 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 ATP5C1P36542 298 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 KIF11P52732 1056 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 ZNF132P52740 706 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 MAP3K7CLP57077 242 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 RPL6Q02878 288 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 ZNF33AQ06730 810 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 IFRD2Q12894 506 aaPredicted RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 SLC14A1Q13336 389 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 HNRNPDQ14103 355 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 KIAA1211LQ6NV74 962 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 TOGARAM2Q6ZUX3 1019 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 ARMCX6Q7L4S7 300 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 CCDC186Q7Z3E2 898 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 NAT16Q8N8M0 369 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 C12orf29Q8N999 325 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 RBBP8NLQ8NC74 664 aaPredicted RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 FAXDC2Q96IV6 333 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 MRGPRX1Q96LB2 322 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 XPO6Q96QU8 1125 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 ACOX2Q99424 681 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 MED10Q9BTT4 135 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 FAM124BQ9H5Z6 455 aaPredicted RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 NMUR1Q9HB89 426 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 APOBEC3GQ9HC16 384 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 DNAJC17Q9NVM6 304 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 CLIC5Q9NZA1 410 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 USP36Q9P275 1121 aaKnown RBP8.85□□□□□ -0.99
PALB2-202ENST00000561514 RCOR1Q9UKL0 485 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 HPSEQ9Y251 543 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
PALB2-202ENST00000561514 NEDD8-MDP1E9PL57 170 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 STC2O76061 302 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 F13A1P00488 732 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 SPINK2P20155 84 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 ACO1P21399 889 aaKnown RBP8.84□□□□□ -0.99
PALB2-202ENST00000561514 MAPK8P45983 427 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 DGKGP49619 791 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 GFPT1Q06210 699 aaPredicted RBP8.84□□□□□ -0.99
PALB2-202ENST00000561514 GOLGA8FQ08AF8 430 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 GOLGA8DPQ0D2H9 430 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 ORC1Q13415 861 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 ZNF423Q2M1K9 1284 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 ANO4Q32M45 955 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 UAP1L1Q3KQV9 507 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 FYB2Q5VWT5 728 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
PALB2-202ENST00000561514 SCD5Q86SK9 330 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 TTC30AQ86WT1 665 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 FAM217AQ8IXS0 508 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 GRAMD1CQ8IYS0 662 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 CHPFQ8IZ52 775 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 DNASE2BQ8WZ79 361 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 NUP205Q92621 2012 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 FOXJ1Q92949 421 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 ELMO3Q96BJ8 720 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 PAGE5Q96GU1 130 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 CDK5RAP1Q96SZ6 601 aaKnown RBP8.84□□□□□ -0.99
PALB2-202ENST00000561514 BBS2Q9BXC9 721 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 NT5C1AQ9BXI3 368 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 NIF3L1Q9GZT8 377 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.84□□□□□ -0.99
PALB2-202ENST00000561514 FAM49BQ9NUQ9 324 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 EXOC1Q9NV70 894 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 SUSD2Q9UGT4 822 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 USP25Q9UHP3 1055 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 DNMT3LQ9UJW3 386 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 LSM7Q9UK45 103 aaKnown RBP8.84□□□□□ -0.99
PALB2-202ENST00000561514 ZNF510Q9Y2H8 683 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 ZNF638Q14966 1978 aaKnown RBP8.84□□□□□ -0.99
PALB2-202ENST00000561514 TNRC6BQ9UPQ9 1833 aaKnown RBP8.84□□□□□ -0.99
PALB2-202ENST00000561514 LAMA5O15230 3695 aa8.84□□□□□ -0.99
PALB2-202ENST00000561514 WDFY3Q8IZQ1 3526 aa8.83□□□□□ -1
PALB2-202ENST00000561514 A0A1W2PQH9 124 aa8.83□□□□□ -1
PALB2-202ENST00000561514 SRRM3A6NNA2 597 aaPredicted RBP8.83□□□□□ -1
PALB2-202ENST00000561514 HYAL3O43820 417 aaPredicted RBP8.83□□□□□ -1
PALB2-202ENST00000561514 OPHN1O60890 802 aa8.83□□□□□ -1
PALB2-202ENST00000561514 RHOBTB3O94955 611 aa8.83□□□□□ -1
PALB2-202ENST00000561514 KLKB1P03952 638 aa8.83□□□□□ -1
PALB2-202ENST00000561514 CFIP05156 583 aa8.83□□□□□ -1
PALB2-202ENST00000561514 IRF1P10914 325 aa8.83□□□□□ -1
PALB2-202ENST00000561514 RARGP13631 454 aa8.83□□□□□ -1
PALB2-202ENST00000561514 CALRP27797 417 aaKnown RBP8.83□□□□□ -1
PALB2-202ENST00000561514 AFMP43652 599 aa8.83□□□□□ -1
PALB2-202ENST00000561514 ME1P48163 572 aa8.83□□□□□ -1
PALB2-202ENST00000561514 MFAP3P55082 362 aa8.83□□□□□ -1
PALB2-202ENST00000561514 SIM1P81133 766 aaPredicted RBP8.83□□□□□ -1
PALB2-202ENST00000561514 EIF4HQ15056 248 aaKnown RBP8.83□□□□□ -1
PALB2-202ENST00000561514 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms