RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ATP2B1P20020 1258 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 GLDCP23378 1020 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 CD6P30203 668 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 NTSR1P30989 418 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 RARRES1P49788 294 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 IL9RQ01113 521 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 TLE1Q04724 770 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 EHHADHQ08426 723 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 DNAJC3Q13217 504 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 KCNB1Q14721 858 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 DHCR24Q15392 516 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 KIF19Q2TAC6 998 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 ZC2HC1CQ53FD0 456 aaPredicted RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 NT5DC1Q5TFE4 455 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 DCAF12L1Q5VU92 463 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 SDE2Q6IQ49 451 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 C12orf40Q86WS4 652 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 ARL14EPQ8N8R7 260 aaPredicted RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 EXD3Q8N9H8 876 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 STKLD1Q8NE28 680 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 MCPH1Q8NEM0 835 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 PIGOQ8TEQ8 1089 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 IPO4Q8TEX9 1081 aaKnown RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 SNRNP27Q8WVK2 155 aaKnown RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 SNX19Q92543 992 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 TOE1Q96GM8 510 aaKnown RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 CNDP2Q96KP4 475 aaKnown RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 PSMG3-AS1Q96PY0 264 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 MTMR9Q96QG7 549 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 CCDC113Q9H0I3 377 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 SLC6A17Q9H1V8 727 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 TTC12Q9H892 705 aaPredicted RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 LRRC4CQ9HCJ2 640 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 CD93Q9NPY3 652 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 VPS54Q9P1Q0 977 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 UXTQ9UBK9 157 aaPredicted RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 TUBGCP4Q9UGJ1 667 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 BRPF3Q9ULD4 1205 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 MAN2B2Q9Y2E5 1009 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 NFE2L3Q9Y4A8 694 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 SNX11Q9Y5W9 270 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 SETD2Q9BYW2 2564 aaPredicted RBP5.71□□□□□ -1.5
HERC1-213ENST00000561359 LRBAP50851 2863 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 STK36Q9NRP7 1315 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 ICE1Q9Y2F5 2266 aa5.71□□□□□ -1.5
HERC1-213ENST00000561359 PLXND1Q9Y4D7 1925 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 ARID2Q68CP9 1835 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 KLF18A0A0U1RQI7 1052 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CCDC196A0A1B0GTZ2 297 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 A0A1W2PQF6 199 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 BLACEA4D250 179 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 C2orf78A6NCI8 922 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 LAD1O00515 517 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 SCAMP3O14828 347 aaKnown RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 SLITRK3O94933 977 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 LDOC1O95751 146 aaPredicted RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 CSH1P0DML2 217 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CSH2P0DML3 217 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 HAPLN1P10915 354 aaPredicted RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 ODC1P11926 461 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 HARSP12081 509 aaKnown RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 HDCP19113 662 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 TYMPP19971 482 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 ITGB7P26010 798 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CD68P34810 354 aaPredicted RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 EIF2DP41214 584 aaKnown RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 AFF3P51826 1226 aaKnown RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 EFNA5P52803 228 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 ATP2C1P98194 919 aaPredicted RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 ZNF568Q3ZCX4 644 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 C10orf76Q5T2E6 689 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 SDHAF4Q5VUM1 108 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 FBXL19Q6PCT2 694 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 MOXD1Q6UVY6 613 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 FILIP1Q7Z7B0 1213 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CHPFQ8IZ52 775 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 TMEM130Q8N3G9 435 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CADM4Q8NFZ8 388 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 OR10T2Q8NGX3 314 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 LRRC15Q8TF66 581 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 BSNDQ8WZ55 320 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 IGSF8Q969P0 613 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 HIC2Q96JB3 615 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 MRGPRX1Q96LB2 322 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 TCEANC2Q96MN5 208 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 ZNF578Q96N58 590 aaPredicted RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 EIF2AK1Q9BQI3 630 aaKnown RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 TCHPQ9BT92 498 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 KIFC3Q9BVG8 833 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 DPH1Q9BZG8 443 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CDT1Q9H211 546 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 KCNMB3Q9NPA1 279 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 STARD5Q9NSY2 213 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 WSB2Q9NYS7 404 aaPredicted RBP5.7□□□□□ -1.5
HERC1-213ENST00000561359 SALL4Q9UJQ4 1053 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 CLCA2Q9UQC9 943 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 ANKRD6Q9Y2G4 727 aa5.7□□□□□ -1.5
HERC1-213ENST00000561359 MYO16Q9Y6X6 1858 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms