RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TCF3P15923 654 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 TBX4P57082 545 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 IQCB1Q15051 598 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 TAF5Q15542 800 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 DCAF6Q58WW2 860 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 DGKKQ5KSL6 1271 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 NAA35Q5VZE5 725 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 KLHDC10Q6PID8 442 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 FAM183BPQ6ZVS7 135 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 HTR3DQ70Z44 454 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 BHLHA9Q7RTU4 235 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 C12orf40Q86WS4 652 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 ERICH1Q86X53 443 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 WDTC1Q8N5D0 677 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 CCDC33Q8N5R6 958 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 DDI1Q8WTU0 396 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 CPLX3Q8WVH0 158 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 IRGQQ8WZA9 623 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
HERC1-212ENST00000561348 CPXM1Q96SM3 734 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 PNKPQ96T60 521 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 FUCA2Q9BTY2 467 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 NAA15Q9BXJ9 866 aaKnown RBP10.57□□□□□ -0.72
HERC1-212ENST00000561348 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 DCLK3Q9C098 648 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 TSPY26PQ9H489 355 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 FAM204AQ9H8W3 233 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 ARHGEF4Q9NR80 690 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 DNAJC17Q9NVM6 304 aaKnown RBP10.57□□□□□ -0.72
HERC1-212ENST00000561348 POLR3BQ9NW08 1133 aaPredicted RBP10.57□□□□□ -0.72
HERC1-212ENST00000561348 DLGAP2Q9P1A6 1054 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 SIK3Q9Y2K2 1263 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 R4GN57 208 aa10.57□□□□□ -0.72
HERC1-212ENST00000561348 COL4A2P08572 1712 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 TRIM24O15164 1050 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 KLKB1P03952 638 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 ERBB2P04626 1255 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 CYBBP04839 570 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 TYRP14679 529 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 DRD1P21728 446 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 TIE1P35590 1138 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 OPRD1P41143 372 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 CXCL12P48061 93 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 PXNP49023 591 aaPredicted RBP10.56□□□□□ -0.72
HERC1-212ENST00000561348 MLLT6P55198 1093 aaPredicted RBP10.56□□□□□ -0.72
HERC1-212ENST00000561348 UBASH3AP57075 661 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 SNX16P57768 344 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 YWHAZP63104 245 aaKnown RBP10.56□□□□□ -0.72
HERC1-212ENST00000561348 FANCCQ00597 558 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 SATB1Q01826 763 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 NHLH1Q02575 133 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 NME3Q13232 169 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 FZD5Q13467 585 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 TMEM196Q5HYL7 178 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 SYPL2Q5VXT5 272 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 DPY19L2P1Q6NXN4 242 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 MSANTD4Q8NCY6 345 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 RPLP0P6Q8NHW5 317 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 CLDN23Q96B33 292 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 PLD4Q96BZ4 506 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 OTUB2Q96DC9 234 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 PIWIL1Q96J94 861 aaKnown RBP10.56□□□□□ -0.72
HERC1-212ENST00000561348 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
HERC1-212ENST00000561348 PHOX2BQ99453 314 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 CHRDQ9H2X0 955 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 STIM2Q9P246 746 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 DEC1Q9P2X7 70 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 AGO1Q9UL18 857 aaKnown RBP10.56□□□□□ -0.72
HERC1-212ENST00000561348 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 SLC8A2Q9UPR5 921 aa10.56□□□□□ -0.72
HERC1-212ENST00000561348 GOLGA6L7A0A1B0GV03 622 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 ANTXRLA6NF34 631 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 LRRC10BA6NIK2 292 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 TULP3O75386 442 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 KAT7O95251 611 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 SP9P0CG40 484 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 CHKAP35790 457 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 WASP42768 502 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 MAGEA9P43362 315 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 RPS9P46781 194 aaKnown RBP10.55□□□□□ -0.72
HERC1-212ENST00000561348 CCR3P51677 355 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 CDK17Q00537 523 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 CCINQ13939 588 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 GAS6Q14393 721 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 PTPN20Q4JDL3 420 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 EFHC1Q5JVL4 640 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 C10orf76Q5T2E6 689 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 FAM102AQ5T9C2 384 aaPredicted RBP10.55□□□□□ -0.72
HERC1-212ENST00000561348 EMC10Q5UCC4 262 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 GRAMD4Q6IC98 578 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 PKN3Q6P5Z2 889 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 TOGARAM2Q6ZUX3 1019 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 APTXQ7Z2E3 356 aaKnown RBP10.55□□□□□ -0.72
HERC1-212ENST00000561348 TMEM110Q86TL2 294 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 SFTPA1Q8IWL2 248 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 DEFB106AQ8N104 65 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 SLC30A5Q8TAD4 765 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 EPS8L1Q8TE68 723 aa10.55□□□□□ -0.72
HERC1-212ENST00000561348 DQX1Q8TE96 717 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms