RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 OPA3Q9H6K4 179 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SYNPO2LQ9H987 977 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 RMI1Q9H9A7 625 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 LRRC4CQ9HCJ2 640 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 PCDHB16Q9NRJ7 776 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 C1GALT1Q9NS00 363 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ABCB8Q9NUT2 735 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FBXO28Q9NVF7 368 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 BEX4Q9NWD9 120 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 GPRC5DQ9NZD1 345 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 DTLQ9NZJ0 730 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 IL1RAPL1Q9NZN1 696 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SELENONQ9NZV5 590 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 MPP6Q9NZW5 540 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ZNF624Q9P2J8 865 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 SUCLA2Q9P2R7 463 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 DKK3Q9UBP4 350 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 DNAJB11Q9UBS4 358 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 ARMCX3Q9UH62 379 aaPredicted RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 AMACRQ9UHK6 382 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 FAM184BQ9ULE4 1060 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 NAALADL1Q9UQQ1 740 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 DRG1Q9Y295 367 aaKnown RBP2.17□□□□□ -2.06
RTF1-207ENST00000561076 TBC1D30Q9Y2I9 924 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 SIT1Q9Y3P8 196 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 TRPV2Q9Y5S1 764 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 CNTNAP4Q9C0A0 1308 aa2.17□□□□□ -2.06
RTF1-207ENST00000561076 GOLGA6L10A0A0M3HER8 536 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 A0A1W2PR48 441 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 A0A1W2PRV1 198 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TCRBV7S2A1N4TA0A589 114 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZC3H12DA2A288 527 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 CCDC151A5D8V7 595 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 GAGE10A6NGK3 116 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 LRRC72A6NJI9 287 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 LIPT2A6NK58 231 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SH2D7A6NKC9 451 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZNF839A8K0R7 811 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 AGAP14A8MT82 685 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 FADS2P1A8MWK0 482 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 WASH4PA8MWX3 477 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PLOD2O00469 737 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZNF213O14771 459 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TM4SF5O14894 197 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PCDH17O14917 1159 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SYN3O14994 580 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MCF2LO15068 1137 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SGSM2O43147 1006 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ZBTB43O43298 467 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PROM1O43490 865 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RRP9O43818 475 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 PPP1R11O60927 126 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 VPS4BO75351 444 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CRCPO75575 148 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 USP2O75604 605 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 KIAA0754O94854 1291 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SASH1O94885 1247 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HAUS5O94927 633 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CER1O95813 267 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 AMY1AP04745 511 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CEACAM5P06731 702 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HEXBP07686 556 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SNRPA1P09661 255 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 CCDC159P0C7I6 412 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ATXN1LP0C7T5 689 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 CCDC192P0DO97 292 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 GAAP10253 952 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PIM1P11309 404 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 CKBP12277 381 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ARF4P18085 180 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 IL10P22301 178 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MST1P26927 711 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 LRPAP1P30533 357 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RFC1P35251 1148 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 SOAT1P35610 550 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 ADCY8P40145 1251 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 VIPR2P41587 438 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLC15A1P46059 708 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 SLC6A9P48067 706 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MRE11P49959 708 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MFAP4P55083 255 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 GMFBP60983 142 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RAP2BP61225 183 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 UFM1P61960 85 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 CD83Q01151 205 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 PIGFQ07326 219 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 KLHL30Q0D2K2 578 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TMEM62Q0P6H9 643 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 LRRC74AQ0VAA2 488 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 TMEM115Q12893 351 aaPredicted RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 SP140Q13342 867 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 IKZF1Q13422 519 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 MTM1Q13496 603 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 BFSP2Q13515 415 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 FRG1Q14331 258 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 OASLQ15646 514 aaKnown RBP2.16□□□□□ -2.06
RTF1-207ENST00000561076 LETM2Q2VYF4 491 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 HSP90AB3PQ58FF7 597 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 NHSL2Q5HYW2 709 aa2.16□□□□□ -2.06
RTF1-207ENST00000561076 RAB41Q5JT25 222 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms