RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 CXCR3P49682 368 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 PLTPP55058 493 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 EIF3EP60228 445 aaKnown RBP17.79■□□□□ 0.44
HDDC3-206ENST00000561036 YWHAGP61981 247 aaKnown RBP eCLIP17.79■□□□□ 0.44
HDDC3-206ENST00000561036 RPL10AP62906 217 aaKnown RBP17.79■□□□□ 0.44
HDDC3-206ENST00000561036 PITX1P78337 314 aaPredicted RBP17.79■□□□□ 0.44
HDDC3-206ENST00000561036 NME3Q13232 169 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 EFHC2Q5JST6 749 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 SLC8B1Q6J4K2 584 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 PQLC3Q8N755 202 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 PLD5Q8N7P1 536 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 PCDH19Q8TAB3 1148 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 SCAMP5Q8TAC9 235 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 B3GALT6Q96L58 329 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 GDAP1L1Q96MZ0 367 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 FAM204AQ9H8W3 233 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 PCDH9Q9HC56 1237 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 PIGVQ9NUD9 493 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 DDIT4Q9NX09 232 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
HDDC3-206ENST00000561036 FAM92AA1XBS5 289 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 CFAP69A5D8W1 941 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 IGLV3-25P01717 112 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 HAPLN1P10915 354 aaPredicted RBP17.78■□□□□ 0.44
HDDC3-206ENST00000561036 STIP1P31948 543 aaKnown RBP17.78■□□□□ 0.44
HDDC3-206ENST00000561036 ADCY8P40145 1251 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 PBX3P40426 434 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 HCAR3P49019 387 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 DEFB103AP81534 67 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 PPIGQ13427 754 aaKnown RBP eCLIP17.78■□□□□ 0.44
HDDC3-206ENST00000561036 BTG3Q14201 252 aaPredicted RBP17.78■□□□□ 0.44
HDDC3-206ENST00000561036 PPP6R3Q5H9R7 873 aaPredicted RBP17.78■□□□□ 0.44
HDDC3-206ENST00000561036 BTBD8Q5XKL5 378 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 GPR65Q8IYL9 337 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 FBXO22Q8NEZ5 403 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 FBXO25Q8TCJ0 367 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 HAUS1Q96CS2 278 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 CSPG4P5Q96PW8 444 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 FAM118BQ9BPY3 351 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 FOXP3Q9BZS1 431 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 HSFX1Q9UBD0 423 aa17.78■□□□□ 0.44
HDDC3-206ENST00000561036 PPFIA2O75334 1257 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 ZNF189O75820 626 aaPredicted RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 SOD2P04179 222 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 PECAM1P16284 738 aaPredicted RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 PSEN1P49768 467 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 XRCC4Q13426 336 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 PSMD5Q16401 504 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 SPOUT1Q5T280 376 aaKnown RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 KIAA1841Q6NSI8 718 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 RSPO2Q6UXX9 243 aaPredicted RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 CEP128Q6ZU80 1094 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 BZW1Q7L1Q6 419 aaKnown RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 TMC3Q7Z5M5 1100 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 ATAD1Q8NBU5 361 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 DQX1Q8TE96 717 aaKnown RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 RSAD2Q8WXG1 361 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 RIN2Q8WYP3 895 aaPredicted RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 EDEM1Q92611 657 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 TMEM169Q96HH4 297 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 PKNOX2Q96KN3 472 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 HERC2P3Q9BVR0 1158 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 TXLNGYQ9BZA5 131 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 SMOC2Q9H3U7 446 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 MED4Q9NPJ6 270 aa17.77■□□□□ 0.44
HDDC3-206ENST00000561036 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 CWC15Q9P013 229 aaKnown RBP17.77■□□□□ 0.44
HDDC3-206ENST00000561036 GOLGA6BA6NDN3 693 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 SGK1O00141 431 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 RBP3P10745 1247 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 YWHAQP27348 245 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 PPM1AP35813 382 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 ARPP19P56211 112 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 ROR1Q01973 937 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 DSG1Q02413 1049 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 EIF4EBP2Q13542 120 aaPredicted RBP17.76■□□□□ 0.43
HDDC3-206ENST00000561036 SLMAPQ14BN4 828 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 DDR2Q16832 855 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 BRMS1LQ5PSV4 323 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 CFAP58Q5T655 872 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 MSANTD2Q6P1R3 559 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 RHBDF2Q6PJF5 856 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 PRSS55Q6UWB4 352 aaPredicted RBP17.76■□□□□ 0.43
HDDC3-206ENST00000561036 RNF19BQ6ZMZ0 732 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 DENND5BQ6ZUT9 1274 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 SCD5Q86SK9 330 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 TAC4Q86UU9 113 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 IQCKQ8N0W5 287 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 COLGALT1Q8NBJ5 622 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 TSEN2Q8NCE0 465 aaKnown RBP17.76■□□□□ 0.43
HDDC3-206ENST00000561036 RNF139Q8WU17 664 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 PGLYRP2Q96PD5 576 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 VN1R3Q9BXE9 311 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 WDCPQ9H6R7 721 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 AAASQ9NRG9 546 aa17.76■□□□□ 0.43
HDDC3-206ENST00000561036 SAE1Q9UBE0 346 aaPredicted RBP17.76■□□□□ 0.43
HDDC3-206ENST00000561036 PRKAG2Q9UGJ0 569 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms