RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 EPHX1P07099 455 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 KRT19P08727 400 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 SCP2P22307 547 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 YWHAQP27348 245 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 EPHA8P29322 1005 aaPredicted RBP10.11□□□□□ -0.79
HERC1-210ENST00000560897 ACSL1P33121 698 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 LSSP48449 732 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 RIPPLY3P57055 190 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 TFAMQ00059 246 aaKnown RBP10.11□□□□□ -0.79
HERC1-210ENST00000560897 ZNF174Q15697 407 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 TTC31Q49AM3 519 aaPredicted RBP10.11□□□□□ -0.79
HERC1-210ENST00000560897 ADALQ6DHV7 355 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 FAM171BQ6P995 826 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 OSTM1Q86WC4 334 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 OXR1Q8N573 874 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 EXD3Q8N9H8 876 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 OVCA2Q8WZ82 227 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 BHMTQ93088 406 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 AASDHPPTQ9NRN7 309 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
HERC1-210ENST00000560897 THAP10Q9P2Z0 257 aaPredicted RBP10.11□□□□□ -0.79
HERC1-210ENST00000560897 SPTBN1Q01082 2364 aaKnown RBP10.1□□□□□ -0.79
HERC1-210ENST00000560897 TRAK2O60296 914 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 TSPAN3O60637 253 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 CDC45O75419 566 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 RTN3O95197 1032 aaPredicted RBP10.1□□□□□ -0.79
HERC1-210ENST00000560897 IL18RAPO95256 599 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 PIGRP01833 764 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 ITGB3P05106 788 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 ACP1P24666 158 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 COPAP53621 1224 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 NCKAP1LP55160 1127 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 ASIC1P78348 528 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 ST3GAL1Q11201 340 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 ZRSR1Q15695 479 aaKnown RBP10.1□□□□□ -0.79
HERC1-210ENST00000560897 SLC45A4Q5BKX6 768 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 SERPINA13PQ6UXR4 307 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 CENPQQ7L2Z9 268 aaPredicted RBP10.1□□□□□ -0.79
HERC1-210ENST00000560897 HS2ST1Q7LGA3 356 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 LRRC52Q8N7C0 313 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 OR2T3Q8NH03 318 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 CACTINQ8WUQ7 758 aaKnown RBP10.1□□□□□ -0.79
HERC1-210ENST00000560897 C8orf48Q96LL4 319 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 SLC6A18Q96N87 628 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 SGK2Q9HBY8 427 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 LRRC4CQ9HCJ2 640 aa10.1□□□□□ -0.79
HERC1-210ENST00000560897 HCRTO43612 131 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 ATP2C2O75185 946 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 PPFIA2O75334 1257 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 DNTTP04053 509 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 ABCD1P33897 745 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 TUBP50607 506 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 ZNF234Q14588 700 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 BMP2KLQ5H9B9 411 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 SLFN12LQ6IEE8 588 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 USP53Q70EK8 1073 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 ANKS1BQ7Z6G8 1248 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 NUP93Q8N1F7 819 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 FAM26EQ8N5C1 309 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 GANCQ8TET4 914 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 HPS3Q969F9 1004 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 PCED1BQ96HM7 432 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 CIPCQ9C0C6 399 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 CCSER2Q9H7U1 834 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 GDAP2Q9NXN4 497 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 PLK2Q9NYY3 685 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 KCND2Q9NZV8 630 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 AGO2Q9UKV8 859 aaKnown RBP10.09□□□□□ -0.79
HERC1-210ENST00000560897 MAN2B2Q9Y2E5 1009 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 C2CD3Q4AC94 2353 aa10.09□□□□□ -0.79
HERC1-210ENST00000560897 PLXNA2O75051 1894 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 A0A1W2PPC4 97 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 BLACEA4D250 179 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 FAM47DPA6NHR8 397 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 GABRDO14764 452 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 CSO75390 466 aaKnown RBP10.08□□□□□ -0.8
HERC1-210ENST00000560897 ITGB2P05107 769 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 CISD3P0C7P0 127 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 PLCG1P19174 1290 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 PRKCHP24723 683 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 CD38P28907 300 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 RBP5P82980 135 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 POU5F1Q01860 360 aaKnown RBP10.08□□□□□ -0.8
HERC1-210ENST00000560897 ENPP2Q13822 863 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 EIF4HQ15056 248 aaKnown RBP10.08□□□□□ -0.8
HERC1-210ENST00000560897 ARL13BQ3SXY8 428 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 MDH1BQ5I0G3 518 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 C3orf38Q5JPI3 329 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 KIAA0895LQ68EN5 471 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 HTR3DQ70Z44 454 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 CSGALNACT2Q8N6G5 542 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 MYCBPAPQ8TBZ2 947 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 EXTL1Q92935 676 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 LIN37Q96GY3 246 aaPredicted RBP10.08□□□□□ -0.8
HERC1-210ENST00000560897 CCNL2Q96S94 520 aaPredicted RBP10.08□□□□□ -0.8
HERC1-210ENST00000560897 ELOVL4Q9GZR5 314 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 ABCG4Q9H172 646 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 FBRSQ9HAH7 460 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
HERC1-210ENST00000560897 ASCL3Q9NQ33 180 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms