RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 GPC5P78333 572 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 TRIM71Q2Q1W2 868 aaKnown RBP5.17□□□□□ -1.58
PSMA4-221ENST00000560842 CHSY1Q86X52 802 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 SYTL1Q8IYJ3 562 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 CLASRPQ8N2M8 674 aaKnown RBP5.17□□□□□ -1.58
PSMA4-221ENST00000560842 FSTL5Q8N475 847 aaPredicted RBP5.17□□□□□ -1.58
PSMA4-221ENST00000560842 ACRBPQ8NEB7 543 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 ADAMTS18Q8TE60 1221 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 OVCA2Q8WZ82 227 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 ZBTB9Q96C00 473 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 C18orf8Q96DM3 657 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 FYTTD1Q96QD9 318 aaKnown RBP5.17□□□□□ -1.58
PSMA4-221ENST00000560842 ARFGAP3Q9NP61 516 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 VPS45Q9NRW7 570 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 TFCP2L1Q9NZI6 479 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 FLRT1Q9NZU1 646 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 SLC39A10Q9ULF5 831 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 CEP83Q9Y592 693 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 SPATA31A1Q5TZJ5 1347 aa5.17□□□□□ -1.58
PSMA4-221ENST00000560842 GXYLT2A0PJZ3 443 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 GOLGA6L3A6NEY3 463 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 EXOC3O60645 756 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 VIPP01282 170 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 TECP42680 631 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 RHBDL3P58872 404 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 SLC10A2Q12908 348 aaPredicted RBP5.16□□□□□ -1.58
PSMA4-221ENST00000560842 LARS2Q15031 903 aaKnown RBP5.16□□□□□ -1.58
PSMA4-221ENST00000560842 PRAMEF17Q5VTA0 474 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 SPICE1Q8N0Z3 855 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 PAAF1Q9BRP4 392 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 SEMA4CQ9C0C4 833 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 HELLSQ9NRZ9 838 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 IGSF9Q9P2J2 1179 aa5.16□□□□□ -1.58
PSMA4-221ENST00000560842 MANSC4A6NHS7 340 aaPredicted RBP5.15□□□□□ -1.59
PSMA4-221ENST00000560842 PCDH17O14917 1159 aa5.15□□□□□ -1.59
PSMA4-221ENST00000560842 KRT72Q14CN4 511 aa5.15□□□□□ -1.59
PSMA4-221ENST00000560842 FAM187BQ17R55 369 aa5.15□□□□□ -1.59
PSMA4-221ENST00000560842 ARHGAP15Q53QZ3 475 aa5.15□□□□□ -1.59
PSMA4-221ENST00000560842 FBXO38Q6PIJ6 1188 aa5.15□□□□□ -1.59
PSMA4-221ENST00000560842 ZNF782Q6ZMW2 699 aaPredicted RBP5.15□□□□□ -1.59
PSMA4-221ENST00000560842 C8orf58Q8NAV2 365 aa5.15□□□□□ -1.59
PSMA4-221ENST00000560842 PNISRQ8TF01 805 aaKnown RBP5.15□□□□□ -1.59
PSMA4-221ENST00000560842 ASB2Q96Q27 587 aa5.15□□□□□ -1.59
PSMA4-221ENST00000560842 A0A087WV62 115 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 UBE2Q2LH0YL09 131 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 ZSCAN9O15535 394 aaPredicted RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 FFAR2O15552 330 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 CA12O43570 354 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 PRAMEF2O60811 474 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 TMIGD3P0DMS9 266 aaPredicted RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 CYP2A6P11509 494 aaPredicted RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 NPPBP16860 134 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 COPB1P53618 953 aaKnown RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 TXNL4AP83876 142 aaKnown RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 SRSF7Q16629 238 aaKnown RBP eCLIP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 TMEM196Q5HYL7 178 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 CRELD2Q6UXH1 353 aaPredicted RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 ZNF66Q6ZN08 573 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 PIK3AP1Q6ZUJ8 805 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 RASGRP3Q8IV61 690 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 MAFAQ8NHW3 353 aaPredicted RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 EID2BQ96D98 161 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 PRR11Q96HE9 360 aaPredicted RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 CCDC17Q96LX7 622 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 CINPQ9BW66 212 aaPredicted RBP5.14□□□□□ -1.59
PSMA4-221ENST00000560842 SAP30LQ9HAJ7 183 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 PLCB1Q9NQ66 1216 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 FSCN3Q9NQT6 498 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 CDC23Q9UJX2 597 aa5.14□□□□□ -1.59
PSMA4-221ENST00000560842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.13□□□□□ -1.59
PSMA4-221ENST00000560842 TRIM38O00635 465 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 CTIFO43310 598 aaKnown RBP5.13□□□□□ -1.59
PSMA4-221ENST00000560842 ITGA5P08648 1049 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 MMP8P22894 467 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 SSBP2P81877 361 aaPredicted RBP5.13□□□□□ -1.59
PSMA4-221ENST00000560842 TNFAIP2Q03169 654 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 CCDC15Q0P6D6 951 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 PTK2BQ14289 1009 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 BRD3Q15059 726 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 EZH2Q15910 746 aaKnown RBP5.13□□□□□ -1.59
PSMA4-221ENST00000560842 C11orf87Q6NUJ2 197 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 MSANTD2Q6P1R3 559 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 ZNF813Q6ZN06 617 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 RSC1A1Q92681 617 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 GRAMD1AQ96CP6 724 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 P2RY11Q96G91 374 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 KCNK9Q9NPC2 374 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 TAGLN3Q9UI15 199 aa5.13□□□□□ -1.59
PSMA4-221ENST00000560842 SMIM22K7EJ46 135 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 CLIC1O00299 241 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 NPC1O15118 1278 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 TAF5LO75529 589 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 USP1O94782 785 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 TUBB4AP04350 444 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 ANXA6P08133 673 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 CERS1P27544 350 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 DUSP1P28562 367 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 SPARCL1Q14515 664 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 STARD3Q14849 445 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 CCDC144NLQ6NUI1 221 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms