RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 SMAD1Q15797 465 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 FAM124AQ86V42 546 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 TRIM9Q9C026 710 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 PCED1AQ9H1Q7 454 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 CYLDQ9NQC7 956 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 DNMT3LQ9UJW3 386 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 KNTC1P50748 2209 aa18.78■□□□□ 0.6
TSPAN3-208ENST00000560514 TMEM131Q92545 1883 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 GREM1O60565 184 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 CCT8P50990 548 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 CYP2J2P51589 502 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 MAP3K7CLP57077 242 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 CYP24A1Q07973 514 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 BIRC3Q13489 604 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 KIF19Q2TAC6 998 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 ZNF699Q32M78 642 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 ZNF667Q5HYK9 610 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 C6orf118Q5T5N4 469 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 DHRS13Q6UX07 377 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 PAQR9Q6ZVX9 377 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 TADA2BQ86TJ2 420 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 NXPE2Q96DL1 559 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 SMYD3Q9H7B4 428 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 FTSJ1Q9UET6 329 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 ZNF510Q9Y2H8 683 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 SLC27A6Q9Y2P4 619 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 SRPRBQ9Y5M8 271 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 SNX11Q9Y5W9 270 aa18.77■□□□□ 0.6
TSPAN3-208ENST00000560514 ATXN7O15265 892 aaPredicted RBP18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 RRP8O43159 456 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 IGLV3-19P01714 112 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 CYBBP04839 570 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 HNF1BP35680 557 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 CHKAP35790 457 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 MFAP3P55082 362 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 ORC1Q13415 861 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 C10orf120Q5SQS8 335 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 SCARA5Q6ZMJ2 495 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 ANKS1BQ7Z6G8 1248 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 ADAT2Q7Z6V5 191 aaKnown RBP18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 ZNF605Q86T29 641 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 ACOT1Q86TX2 421 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 TMPRSS12Q86WS5 348 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 FUKQ8N0W3 1084 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 CLIC6Q96NY7 704 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 SMOQ99835 787 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 PANK2Q9BZ23 570 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 LRRC27Q9C0I9 530 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 FBXO2Q9UK22 296 aaPredicted RBP18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 FBXO10Q9UK96 956 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 ANKRD6Q9Y2G4 727 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 CLIC4Q9Y696 253 aa18.76■□□□□ 0.59
TSPAN3-208ENST00000560514 PLK4O00444 970 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 CAPN9O14815 690 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 EPHX1P07099 455 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 RARGP13631 454 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 P4HA1P13674 534 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 CCDC130P13994 396 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 JUPP14923 745 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 ACO1P21399 889 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 PGFP49763 221 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 ZNF234Q14588 700 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 PTPRNQ16849 979 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 GEN1Q17RS7 908 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 KLHDC10Q6PID8 442 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 SERPINA13PQ6UXR4 307 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 XXYLT1Q8NBI6 393 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 SLC2A14Q8TDB8 520 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 IGSF8Q969P0 613 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 CIPCQ9C0C6 399 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 XYLT2Q9H1B5 865 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 ASH1LQ9NR48 2969 aaKnown RBP18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 SCML2Q9UQR0 700 aa18.75■□□□□ 0.59
TSPAN3-208ENST00000560514 CKAP5Q14008 2032 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 MDM4O15151 490 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 CLIC2O15247 247 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 EIF3DO15371 548 aaKnown RBP eCLIP18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 PCDHGA12O60330 932 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 BEST1O76090 585 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 FAM200BP0CF97 657 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 GRIA4P48058 902 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 ENPP2Q13822 863 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 EIF4HQ15056 248 aaKnown RBP18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 Q6ZNB5 142 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 ZMIZ2Q8NF64 920 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 C1orf216Q8TAB5 229 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 HPS3Q969F9 1004 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 JAKMIP2Q96AA8 810 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 LHX5Q9H2C1 402 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 CSNK1G1Q9HCP0 422 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 AGPAT3Q9NRZ7 376 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 ELOVL2Q9NXB9 296 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 NUDT5Q9UKK9 219 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 AK5Q9Y6K8 562 aa18.74■□□□□ 0.59
TSPAN3-208ENST00000560514 VPS37CA5D8V6 355 aaPredicted RBP18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 KCNK3O14649 394 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 CYP26A1O43174 497 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 CD2BP2O95400 341 aaKnown RBP18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 RALAP11233 206 aa18.73■□□□□ 0.59
TSPAN3-208ENST00000560514 ITPKBP27987 946 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms