RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 KLHL5Q96PQ7 755 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 PEBP4Q96S96 227 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ZNF670Q9BS34 389 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 C17orf80Q9BSJ5 609 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 SNRNP25Q9BV90 132 aaKnown RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ADAM33Q9BZ11 813 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 FRMD8P1Q9BZ68 369 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 SMOC2Q9H3U7 446 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 SLITRK6Q9H5Y7 841 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 WDCPQ9H6R7 721 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 FAM204AQ9H8W3 233 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 WDR6Q9NNW5 1121 aaKnown RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 ALG13Q9NP73 1137 aaKnown RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 RBM12Q9NTZ6 932 aaKnown RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 PIGVQ9NUD9 493 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 DDIT4Q9NX09 232 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 RCOR3Q9P2K3 495 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 DPP7Q9UHL4 492 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 FEZ2Q9UHY8 353 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-209ENST00000560463 MSRAQ9UJ68 235 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 FBXW11Q9UKB1 542 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 FZD10Q9ULW2 581 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 AP4E1Q9UPM8 1137 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 YIPF1Q9Y548 306 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 INSL5Q9Y5Q6 135 aa8.96□□□□□ -0.98
TRAF3-209ENST00000560463 TARSL2A2RTX5 802 aaKnown RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 C2orf71A6NGG8 1288 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 PI4K2BG5E9Z4 385 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 IRAK2O43187 625 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 TGM5O43548 720 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 PHF2O75151 1096 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 SOAT2O75908 522 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 GLUD1P00367 558 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 CA3P07451 260 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 SLC2A3P11169 496 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 HMGA1P17096 107 aaKnown RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 TFE3P19532 575 aaPredicted RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 MCM3P25205 808 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 L1CAMP32004 1257 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 ADRA1BP35368 520 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 TUBP50607 506 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 KPNA1P52294 538 aaPredicted RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 C2orf54Q08AI8 447 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 TAF10Q12962 218 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 NME3Q13232 169 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 DHX34Q14147 1143 aaKnown RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 DPYSL3Q14195 570 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 KRT81Q14533 505 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 PPP2R5DQ14738 602 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 ERCC6LQ2NKX8 1250 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 SMTNL2Q2TAL5 461 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 PABPC1LQ4VXU2 614 aaKnown RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 EFHC2Q5JST6 749 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 TEX35Q5T0J7 233 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 C8orf74Q6P047 294 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 AADACL2Q6P093 401 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 BBS12Q6ZW61 710 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 MAATS1Q7Z4T9 603 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 FAM131BQ86XD5 332 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 ELMOD1Q8N336 334 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 NOA1Q8NC60 698 aaKnown RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 STKLD1Q8NE28 680 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 GPR152Q8TDT2 470 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 DQX1Q8TE96 717 aaKnown RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 GIPC2Q8TF65 315 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 RAPGEF5Q92565 580 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 PSMG2Q969U7 264 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 AP1M1Q9BXS5 423 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 CALN1Q9BXU9 219 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 MAK16Q9BXY0 300 aaKnown RBP8.95□□□□□ -0.98
TRAF3-209ENST00000560463 LMAN2LQ9H0V9 348 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 PLEKHA4Q9H4M7 779 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 LRRC19Q9H756 370 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 NMUR1Q9HB89 426 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 SMARCAL1Q9NZC9 954 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 TRPM5Q9NZQ8 1165 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 GMIPQ9P107 970 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 CALCOCO1Q9P1Z2 691 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 PCYOX1Q9UHG3 505 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 TLR6Q9Y2C9 796 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 DOCK8Q8NF50 2099 aa8.95□□□□□ -0.98
TRAF3-209ENST00000560463 DENND4AQ7Z401 1863 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 KIF26AQ9ULI4 1882 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 SYNJ2BP-COX16A0A087WUM0 186 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 GRXCR1A8MXD5 290 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 APOC4-APOC2K7ER74 178 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 DYNC1I1O14576 645 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 APOC2P02655 101 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 LRG1P02750 347 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 RARGP13631 454 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 MYOGP15173 224 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 ZFXP17010 805 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 DNAJB1P25685 340 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 CCR1P32246 355 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 HTR7P34969 479 aa8.94□□□□□ -0.98
TRAF3-209ENST00000560463 ATP5C1P36542 298 aaKnown RBP8.94□□□□□ -0.98
TRAF3-209ENST00000560463 ARL4AP40617 200 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms