RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 GREM1O60565 184 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 CDK11BP21127 795 aaKnown RBP14.27□□□□□ -0.13
SMAD3-214ENST00000560402 CSRP1P21291 193 aaKnown RBP14.27□□□□□ -0.13
SMAD3-214ENST00000560402 ACO1P21399 889 aaKnown RBP14.27□□□□□ -0.13
SMAD3-214ENST00000560402 NTSR1P30989 418 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 GTF2H1P32780 548 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 MAP7D1Q3KQU3 841 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 EMC10Q5UCC4 262 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 PEAR1Q5VY43 1037 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-214ENST00000560402 LYSMD4Q5XG99 296 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 GPRIN1Q7Z2K8 1008 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 CCDC186Q7Z3E2 898 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 RABEPKQ7Z6M1 372 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 TMEM25Q86YD3 366 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 SYT12Q8IV01 421 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 PGBD3Q8N328 593 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 NAT16Q8N8M0 369 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 SPC24Q8NBT2 197 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 PIGKQ92643 395 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 ELMO3Q96BJ8 720 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 CYFIP2Q96F07 1278 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 TWNKQ96RR1 684 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 BBS2Q9BXC9 721 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 TMEM8AQ9HCN3 771 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.27□□□□□ -0.13
SMAD3-214ENST00000560402 DNMT3LQ9UJW3 386 aa14.27□□□□□ -0.13
SMAD3-214ENST00000560402 PSMA7O14818 248 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 STX10O60499 249 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 ZNF217O75362 1048 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 TRIM49P0CI25 452 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 TRIM49CP0CI26 452 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 RARGP13631 454 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 TYRP14679 529 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 PLA2G4AP47712 749 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 GCLMP48507 274 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 ZNF252P-AS1Q0IIN9 211 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 E2F5Q15329 346 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 EDRF1Q3B7T1 1238 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 FILIP1LQ4L180 1135 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 TRIM61Q5EBN2 209 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 KRT39Q6A163 491 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 SDE2Q6IQ49 451 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 Q6ZNB5 142 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 TAS1R2Q8TE23 839 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 WBP2Q969T9 261 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 APOBEC3GQ9HC16 384 aaKnown RBP14.26□□□□□ -0.13
SMAD3-214ENST00000560402 CLIC5Q9NZA1 410 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 MBD1Q9UIS9 605 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-214ENST00000560402 ZNF510Q9Y2H8 683 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 NFE2L3Q9Y4A8 694 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 CEP295Q9C0D2 2601 aa14.26□□□□□ -0.13
SMAD3-214ENST00000560402 ASCC3Q8N3C0 2202 aaKnown RBP14.25□□□□□ -0.13
SMAD3-214ENST00000560402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 A0A1W2PQH9 124 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 GFRA2O00451 464 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 CDX4O14627 284 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-214ENST00000560402 RALAP11233 206 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 CEACAM1P13688 526 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 GABRG2P18507 467 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 CLCN1P35523 988 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 DGKGP49619 791 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 MXI1P50539 228 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 KIF11P52732 1056 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 UBASH3AP57075 661 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 MCCD1P59942 119 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-214ENST00000560402 FANCCQ00597 558 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 PPP3CAQ08209 521 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 PAK1Q13153 545 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 NCAPHQ15003 741 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 C10orf120Q5SQS8 335 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 EGFLAMQ63HQ2 1017 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 SLC23A3Q6PIS1 610 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 TMEFF1Q8IYR6 380 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 CHPFQ8IZ52 775 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 ARHGAP18Q8N392 663 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 CEP76Q8TAP6 659 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 RLN3Q8WXF3 142 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 JAKMIP2Q96AA8 810 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 GABRG3Q99928 467 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 DUSP16Q9BY84 665 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 DCLK3Q9C098 648 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 NMUR1Q9HB89 426 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 OSER1Q9NX31 292 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 IFNKQ9P0W0 207 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 CALCOCO1Q9P1Z2 691 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 NAGPAQ9UK23 515 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 USP3Q9Y6I4 520 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.25□□□□□ -0.13
SMAD3-214ENST00000560402 PCDH15Q96QU1 1955 aa14.25□□□□□ -0.13
SMAD3-214ENST00000560402 A0A1W2PQF6 199 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 BICDL2A1A5D9 508 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 PATE3B3GLJ2 98 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 NPC1O15118 1278 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 STC2O76061 302 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 TBX18O95935 607 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 CD58P19256 250 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 PTGER3P43115 390 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 PGFP49763 221 aa14.24□□□□□ -0.13
SMAD3-214ENST00000560402 IRX4P78413 519 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms