RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 DEFB106AQ8N104 65 aa20.36■□□□□ 0.85
SHF-205ENST00000559566 IPO4Q8TEX9 1081 aaKnown RBP20.36■□□□□ 0.85
SHF-205ENST00000559566 SLC2A13Q96QE2 648 aa20.36■□□□□ 0.85
SHF-205ENST00000559566 ADAM33Q9BZ11 813 aa20.36■□□□□ 0.85
SHF-205ENST00000559566 POPDC2Q9HBU9 364 aa20.36■□□□□ 0.85
SHF-205ENST00000559566 RBM12Q9NTZ6 932 aaKnown RBP20.36■□□□□ 0.85
SHF-205ENST00000559566 TBC1D14Q9P2M4 693 aa20.36■□□□□ 0.85
SHF-205ENST00000559566 AGO1Q9UL18 857 aaKnown RBP20.36■□□□□ 0.85
SHF-205ENST00000559566 STRIP2Q9ULQ0 834 aa20.36■□□□□ 0.85
SHF-205ENST00000559566 SIT1Q9Y3P8 196 aa20.36■□□□□ 0.85
SHF-205ENST00000559566 KMT2EQ8IZD2 1858 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 ANTXRLA6NF34 631 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 MAN2B1O00754 1011 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 SLC9A3R1O14745 358 aaPredicted RBP20.35■□□□□ 0.85
SHF-205ENST00000559566 IGLV3-27P01718 113 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 CHRNB1P11230 501 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 YWHAZP63104 245 aaKnown RBP20.35■□□□□ 0.85
SHF-205ENST00000559566 OTUD1Q5VV17 481 aaPredicted RBP20.35■□□□□ 0.85
SHF-205ENST00000559566 FSTL4Q6MZW2 842 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 TRNP1Q6NT89 227 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 BEND5Q7L4P6 421 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 SLC26A9Q7LBE3 791 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 ZNF571Q7Z3V5 609 aaPredicted RBP20.35■□□□□ 0.85
SHF-205ENST00000559566 DENND1CQ8IV53 801 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 CPLX3Q8WVH0 158 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 EZH1Q92800 747 aaPredicted RBP20.35■□□□□ 0.85
SHF-205ENST00000559566 GOLGA1Q92805 767 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 C18orf8Q96DM3 657 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 EDEM3Q9BZQ6 932 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 SYNCQ9H7C4 482 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 ASNSD1Q9NWL6 643 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 TAS2R14Q9NYV8 317 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 AIPL1Q9NZN9 384 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 CALCOCO1Q9P1Z2 691 aa20.35■□□□□ 0.85
SHF-205ENST00000559566 LSM7Q9UK45 103 aaKnown RBP20.35■□□□□ 0.85
SHF-205ENST00000559566 HBS1LQ9Y450 684 aaKnown RBP20.35■□□□□ 0.85
SHF-205ENST00000559566 ITIH6Q6UXX5 1313 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 A0A1W2PQJ5 194 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 IGLV3-25P01717 112 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 SKILP12757 684 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 TFE3P19532 575 aaPredicted RBP20.34■□□□□ 0.85
SHF-205ENST00000559566 MMP8P22894 467 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 PRKCIP41743 596 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 SLC6A11P48066 632 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 GALK1P51570 392 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 GOLGA8FQ08AF8 430 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 GOLGA8DPQ0D2H9 430 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 SFMBT2Q5VUG0 894 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 TRIM72Q6ZMU5 477 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 DNAAF5Q86Y56 855 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 SFTPA1Q8IWL2 248 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 PLD4Q96BZ4 506 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 OTUB2Q96DC9 234 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 MSANTD3Q96H12 275 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 FCRL2Q96LA5 508 aaPredicted RBP20.34■□□□□ 0.85
SHF-205ENST00000559566 C11orf70Q9BRQ4 267 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 NUP58Q9BVL2 599 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 HAUS4Q9H6D7 363 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 SPHK2Q9NRA0 654 aa20.34■□□□□ 0.85
SHF-205ENST00000559566 SEPT11Q9NVA2 429 aaKnown RBP20.34■□□□□ 0.85
SHF-205ENST00000559566 GOLGA8SH3BPF8 625 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 TRDMT1O14717 391 aaKnown RBP20.33■□□□□ 0.85
SHF-205ENST00000559566 HSF2BPO75031 334 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 DAB1O75553 588 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 GJB6O95452 261 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 GLI1P08151 1106 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 ADH5P11766 374 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 CENPCQ03188 943 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 EIF4EBP2Q13542 120 aaPredicted RBP20.33■□□□□ 0.85
SHF-205ENST00000559566 GAS6Q14393 721 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 DCAF6Q58WW2 860 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 TMEM196Q5HYL7 178 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 EFHC1Q5JVL4 640 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 HGSNATQ68CP4 663 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 ZNF397Q8NF99 534 aaPredicted RBP20.33■□□□□ 0.85
SHF-205ENST00000559566 CLDN23Q96B33 292 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 SLC39A13Q96H72 371 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 OSBPL6Q9BZF3 934 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 CAPN11Q9UMQ6 739 aa20.33■□□□□ 0.85
SHF-205ENST00000559566 CAPN9O14815 690 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 TRIM24O15164 1050 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 IRAK2O43187 625 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 TRUB2O95900 331 aaKnown RBP20.32■□□□□ 0.84
SHF-205ENST00000559566 EGFP01133 1207 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 TBX4P57082 545 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 Q6ZS52 159 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 TPGS1Q6ZTW0 290 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 TOGARAM2Q6ZUX3 1019 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 VSTM4Q8IW00 320 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 ETFBKMTQ8IXQ9 262 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 FAM217AQ8IXS0 508 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 LMAN1LQ9HAT1 526 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 XPO7Q9UIA9 1087 aaKnown RBP20.32■□□□□ 0.84
SHF-205ENST00000559566 TMEM59LQ9UK28 342 aa20.32■□□□□ 0.84
SHF-205ENST00000559566 GFRA2O00451 464 aa20.31■□□□□ 0.84
SHF-205ENST00000559566 DDX3XO00571 662 aaKnown RBP eCLIP20.31■□□□□ 0.84
SHF-205ENST00000559566 HOXC11O43248 304 aaPredicted RBP20.31■□□□□ 0.84
SHF-205ENST00000559566 CBFA2T2O43439 604 aa20.31■□□□□ 0.84
SHF-205ENST00000559566 CASP14P31944 242 aa20.31■□□□□ 0.84
SHF-205ENST00000559566 FLT3P36888 993 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms