RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ZDHHC17Q8IUH5 632 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 DENND1CQ8IV53 801 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CCDC117Q8IWD4 279 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 SCUBE3Q8IX30 993 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 ZNF687Q8N1G0 1237 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CAMKK1Q8N5S9 505 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 ZNF557Q8N988 423 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 TMEM35BQ8NCS4 154 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 MSANTD4Q8NCY6 345 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 RPLP0P6Q8NHW5 317 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 KCNV2Q8TDN2 545 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 DDI1Q8WTU0 396 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 UCMAQ8WVF2 138 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SHC3Q92529 594 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 EDEM1Q92611 657 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 PLD4Q96BZ4 506 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 CHFRQ96EP1 664 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 PPP1R13BQ96KQ4 1090 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 ZFRQ96KR1 1074 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 SERPINB11Q96P15 392 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 DDX50Q9BQ39 737 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 BPIFA3Q9BQP9 254 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 LSM14BQ9BX40 385 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 STK33Q9BYT3 514 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 VPS16Q9H269 839 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 LHX5Q9H2C1 402 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 NMUR1Q9HB89 426 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 POPDC2Q9HBU9 364 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 PLCB1Q9NQ66 1216 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 ARHGEF4Q9NR80 690 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 FAM207AQ9NSI2 230 aaPredicted RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 RBM12Q9NTZ6 932 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 FAM86C1Q9NVL1 165 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 DNAJC17Q9NVM6 304 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 TMEM51Q9NW97 253 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TAB2Q9NYJ8 693 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 TMEM63CQ9P1W3 806 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SFMBT1Q9UHJ3 866 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 SLC12A6Q9UHW9 1150 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 PCDHGC3Q9UN70 934 aa4.57□□□□□ -1.68
SNX1-205ENST00000559339 HBS1LQ9Y450 684 aaKnown RBP4.57□□□□□ -1.68
SNX1-205ENST00000559339 PTPRZ1P23471 2315 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 A0A0A0MRY4 1105 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 SYCE3A1L190 88 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 LRRC10BA6NIK2 292 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 LGALS16A8MUM7 142 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 E5RJQ4 531 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 F8VZ95 297 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 GOLGA6L19H0YKK7 550 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TULP2O00295 520 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 FOXN3O00409 490 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 PIK3R2O00459 728 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 NPC1O15118 1278 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 MDM4O15151 490 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 IRAK2O43187 625 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 CACNG3O60359 315 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 GFRA3O60609 400 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 HSF2BPO75031 334 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TULP3O75386 442 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 APBB3O95704 486 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 LSM8O95777 96 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 LATS1O95835 1130 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 SERPINC1P01008 464 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 APOEP02649 317 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 GLI1P08151 1106 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 SLC2A3P11169 496 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 ABCB4P21439 1286 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 OPRD1P41143 372 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 STAT1P42224 750 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 RPL34P49207 117 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 DGKGP49619 791 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 DGKEP52429 567 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 COPB1P53618 953 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 SEC13P55735 322 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TBX4P57082 545 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 POLR2FP61218 127 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 CDK17Q00537 523 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 SATB1Q01826 763 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 APBA1Q02410 837 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 RING1Q06587 406 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 PDCLQ13371 301 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 NNTQ13423 1086 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TRIP4Q15650 581 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 ANO6Q4KMQ2 910 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 MPPE1Q53F39 396 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 DCAF6Q58WW2 860 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 EOGTQ5NDL2 527 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 C10orf76Q5T2E6 689 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 MPP7Q5T2T1 576 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 ADGRF1Q5T601 910 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 HEATR6Q6AI08 1181 aaKnown RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 GRAMD4Q6IC98 578 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 DENND1BQ6P3S1 775 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 TSSK4Q6SA08 328 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 Q6ZNB5 142 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 PRR23BQ6ZRT6 265 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 C11orf57Q6ZUT1 292 aaPredicted RBP4.56□□□□□ -1.68
SNX1-205ENST00000559339 CEP68Q76N32 757 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 BEND5Q7L4P6 421 aa4.56□□□□□ -1.68
SNX1-205ENST00000559339 CACNA2D4Q7Z3S7 1137 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms