RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 POC1BQ8TC44 478 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 KCNG4Q8TDN1 519 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 DIS3LQ8TF46 1054 aaKnown RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 CAVIN3Q969G5 261 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 ITFG2Q969R8 447 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 PTCD3Q96EY7 689 aaKnown RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 FAM210AQ96ND0 272 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 AIFM3Q96NN9 605 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 CAMKK2Q96RR4 588 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 BAG1Q99933 345 aaPredicted RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 TEX13AQ9BXU3 409 aaPredicted RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 VCPKMTQ9H867 229 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 MRPL44Q9H9J2 332 aaKnown RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 ATP6V0A4Q9HBG4 840 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 VEZTQ9HBM0 779 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 SLAMF7Q9NQ25 335 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 ECHDC1Q9NTX5 307 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 KCTD5Q9NXV2 234 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 ZIM2Q9NZV7 527 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 C11orf21Q9P2W6 132 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 TESQ9UGI8 421 aaKnown RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 ZNF180Q9UJW8 692 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 ZDHHC8Q9ULC8 765 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 PNMA8BQ9ULN7 279 aaPredicted RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 PCDHA7Q9UN72 937 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 NR2E3Q9Y5X4 410 aa3.54□□□□□ -1.84
HERC1-203ENST00000558532 PHRF1Q9P1Y6 1649 aaKnown RBP3.54□□□□□ -1.84
HERC1-203ENST00000558532 MST1RQ04912 1400 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 SIPA1L3O60292 1781 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 COL11A2P13942 1736 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 NWD2Q9ULI1 1742 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 COL15A1P39059 1388 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 TMEM94Q12767 1356 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 MROH7-TTC4A0A0A0MT08 1334 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 ANKRD18BA2A2Z9 1011 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CTAGE15A4D2H0 777 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 TTC36A6NLP5 189 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 GOLGA8KD6RF30 607 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 PSMD14O00487 310 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 MGST3O14880 152 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 LIN7AO14910 233 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 JAK2O60674 1132 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 RFPL1O75677 317 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CTDNEP1O95476 244 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 SLC3A2P08195 630 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 HOXB7P09629 217 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 NBPF7P0C2Y1 421 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 UBTFL1P0CB47 393 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 CTAGE8P0CG41 777 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 TOP1P11387 765 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 NEFHP12036 1026 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 ATP1A3P13637 1013 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 GATA3P23771 443 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CMA1P23946 247 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 PLA2G5P39877 138 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CLK3P49761 638 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 TOB1P50616 345 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 NDUFA8P51970 172 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 ZNF135P52742 658 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 UBASH3AP57075 661 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 PIGFQ07326 219 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 ACTN3Q08043 901 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 DYRK1AQ13627 763 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 DCTN1Q14203 1278 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 HABP2Q14520 560 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 SLMAPQ14BN4 828 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 PPP2R5AQ15172 486 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 SF3B3Q15393 1217 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 SPECC1LQ69YQ0 1117 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 C6orf89Q6UWU4 347 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CWC27Q6UX04 472 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 TOGARAM2Q6ZUX3 1019 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 EPM2AIP1Q7L775 607 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 APTXQ7Z2E3 356 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 TRAPPC11Q7Z392 1133 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 PPP1R42Q7Z4L9 355 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 PPP1R32Q7Z5V6 425 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CTAGE6Q86UF2 777 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 NBPF5PQ86XG9 351 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 CCDC50Q8IVM0 306 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CTAGE4Q8IX94 777 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 SH2D3CQ8N5H7 860 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CELF5Q8N6W0 485 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 TRIML1Q8N9V2 468 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 FAM76AQ8TAV0 307 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 FBXO41Q8TF61 875 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 AENQ8WTP8 325 aaKnown RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 CCDC12Q8WUD4 166 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 P3H4Q92791 437 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CCDC51Q96ER9 411 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 SLC35A4Q96G79 324 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 FAM167AQ96KS9 214 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 TAAR9Q96RI9 348 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 TRIB1Q96RU8 372 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 MAP3K14Q99558 947 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 CGRRF1Q99675 332 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 AIFM2Q9BRQ8 373 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 LRFN3Q9BTN0 628 aa3.53□□□□□ -1.84
HERC1-203ENST00000558532 TRIM6Q9C030 488 aaPredicted RBP3.53□□□□□ -1.84
HERC1-203ENST00000558532 TINAGL1Q9GZM7 467 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 210.3 ms