RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 EGFLAMQ63HQ2 1017 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 FOXR2Q6PJQ5 311 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 BHLHA9Q7RTU4 235 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 RASSF3Q86WH2 238 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 C12orf50Q8NA57 414 aaPredicted RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 RNF139Q8WU17 664 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 RLN3Q8WXF3 142 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 P2RY11Q96G91 374 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 LOXL4Q96JB6 756 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 ZSWIM1Q9BR11 485 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 INTS2Q9H0H0 1204 aaKnown RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 POLMQ9NP87 494 aaPredicted RBP12.49□□□□□ -0.41
HERC1-202ENST00000558324 MARK1Q9P0L2 795 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 KIAA1468Q9P260 1216 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 KIAA1257Q9ULG3 409 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 MYOFQ9NZM1 2061 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 EML5Q05BV3 1969 aa12.49□□□□□ -0.41
HERC1-202ENST00000558324 PMM2O15305 246 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 MSI1O43347 362 aaKnown RBP12.48□□□□□ -0.41
HERC1-202ENST00000558324 RHOBTB1O94844 696 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 KRT5P13647 590 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 HOXB2P14652 356 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 SDHBP21912 280 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 FOXK2Q01167 660 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 BSPRYQ5W0U4 402 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 PM20D1Q6GTS8 502 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 TCEAL6Q6IPX3 200 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 LCLAT1Q6UWP7 414 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 TRMT11Q7Z4G4 463 aaKnown RBP12.48□□□□□ -0.41
HERC1-202ENST00000558324 FMNL3Q8IVF7 1028 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 NETO1Q8TDF5 533 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 TCEAL3Q969E4 200 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 ZC3H10Q96K80 434 aaKnown RBP12.48□□□□□ -0.41
HERC1-202ENST00000558324 KREMEN1Q96MU8 473 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 ACOX2Q99424 681 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 DCLK3Q9C098 648 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 SFMBT1Q9UHJ3 866 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 AGO1Q9UL18 857 aaKnown RBP12.48□□□□□ -0.41
HERC1-202ENST00000558324 HCN2Q9UL51 889 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.48□□□□□ -0.41
HERC1-202ENST00000558324 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 SPTBN4Q9H254 2564 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 WDR87Q6ZQQ6 2873 aa12.48□□□□□ -0.41
HERC1-202ENST00000558324 PRRT4C9JH25 899 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
HERC1-202ENST00000558324 KCNA4P22459 653 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 NTSR1P30989 418 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 CHKAP35790 457 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 MARSP56192 900 aaKnown RBP12.47□□□□□ -0.41
HERC1-202ENST00000558324 DAOAP59103 153 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 GCNT1Q02742 428 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 PKDCCQ504Y2 493 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 PMS2CLQ68D20 193 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 PMF1Q6P1K2 205 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 ARMCX6Q7L4S7 300 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 FRMD1Q8N878 549 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 KCTD13Q8WZ19 329 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 PLD4Q96BZ4 506 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 SPACA7Q96KW9 195 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 RTKNQ9BST9 563 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 CRACR2AQ9BSW2 395 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 MIS12Q9H081 205 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 CNGB3Q9NQW8 809 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 RXFP3Q9NSD7 469 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 OLA1Q9NTK5 396 aaKnown RBP12.47□□□□□ -0.41
HERC1-202ENST00000558324 CACNA2D2Q9NY47 1150 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 ZNF510Q9Y2H8 683 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 RAD54BQ9Y620 910 aa12.47□□□□□ -0.41
HERC1-202ENST00000558324 MAP3K13O43283 966 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 TSPAN3O60637 253 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 GABBR2O75899 941 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 PENKP01210 267 aaPredicted RBP12.46□□□□□ -0.41
HERC1-202ENST00000558324 CYBBP04839 570 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 ZNF806P0C7X5 589 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 GABRG2P18507 467 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 DHPSP49366 369 aaPredicted RBP12.46□□□□□ -0.41
HERC1-202ENST00000558324 ZNF132P52740 706 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 APBA1Q02410 837 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 STILQ15468 1287 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 CNGA2Q16280 664 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 FYB2Q5VWT5 728 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 SDE2Q6IQ49 451 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 GJB7Q6PEY0 223 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 OLIG1Q8TAK6 271 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 KCNV2Q8TDN2 545 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 DDI1Q8WTU0 396 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 SLC35F5Q8WV83 523 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 MED15Q96RN5 788 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 UBE2TQ9NPD8 197 aaPredicted RBP12.46□□□□□ -0.41
HERC1-202ENST00000558324 ST7Q9NRC1 585 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 STARD13Q9Y3M8 1113 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
HERC1-202ENST00000558324 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms