RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 OTOL1A6NHN0 477 aaPredicted RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 LRRC53A6NM62 1247 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 H0Y858 1186 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 PAPSS1O43252 624 aaPredicted RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 HSF2BPO75031 334 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 MOCS2O96007 188 aaPredicted RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 APOEP02649 317 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 ERBB2P04626 1255 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 APODP05090 189 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 TPM1P09493 284 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 TNFAIP3P21580 790 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 DRD1P21728 446 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 CHKAP35790 457 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 SLC11A2P49281 568 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 GALK1P51570 392 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 NUBP1P53384 320 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 MLLT6P55198 1093 aaPredicted RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 JAM2P57087 298 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 YWHAZP63104 245 aaKnown RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 CDK17Q00537 523 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 CDR2Q01850 454 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 ANGPT1Q15389 498 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 TDRD12Q587J7 1177 aaKnown RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 SFMBT2Q5VUG0 894 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 NUGGCQ68CJ6 796 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 HTR3DQ70Z44 454 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 BHLHA9Q7RTU4 235 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 APTXQ7Z2E3 356 aaKnown RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 TMEM110Q86TL2 294 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 CCDC117Q8IWD4 279 aaPredicted RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 UNC45BQ8IWX7 931 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 ADGRG2Q8IZP9 1017 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 KIAA1958Q8N8K9 716 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 CCDC26Q8TAB7 109 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 DDI1Q8WTU0 396 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 SLC20A1Q8WUM9 679 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 CPLX3Q8WVH0 158 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 WBP2Q969T9 261 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 CHFRQ96EP1 664 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 NAP1L5Q96NT1 182 aaPredicted RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 DDX23Q9BUQ8 820 aaKnown RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 NUP58Q9BVL2 599 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 IRF2BPLQ9H1B7 796 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 KCNH6Q9H252 994 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 ARHGEF4Q9NR80 690 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 DNAJC17Q9NVM6 304 aaKnown RBP9.37□□□□□ -0.91
SPG11-207ENST00000558138 TJP2Q9UDY2 1190 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 SLC12A6Q9UHW9 1150 aa9.37□□□□□ -0.91
SPG11-207ENST00000558138 COL4A2P08572 1712 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 A0A1W2PQC6 194 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 TBC1D3BA6NDS4 549 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 TRDMT1O14717 391 aaKnown RBP9.36□□□□□ -0.91
SPG11-207ENST00000558138 TSPAN3O60637 253 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 EGFP01133 1207 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 TYRP14679 529 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 DESP17661 470 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 SULT1E1P49888 294 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 SLC6A3Q01959 620 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 CSTF1Q05048 431 aaKnown RBP9.36□□□□□ -0.91
SPG11-207ENST00000558138 NME3Q13232 169 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 TRIP4Q15650 581 aaPredicted RBP9.36□□□□□ -0.91
SPG11-207ENST00000558138 PTPN20Q4JDL3 420 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 GRAMD4Q6IC98 578 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 DPY19L2P1Q6NXN4 242 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 MMS22LQ6ZRQ5 1243 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 SND1Q7KZF4 910 aaKnown RBP eCLIP9.36□□□□□ -0.91
SPG11-207ENST00000558138 PHLDB2Q86SQ0 1253 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 TMEM25Q86YD3 366 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 ZDHHC17Q8IUH5 632 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 C1orf210Q8IVY1 113 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 DEFB106AQ8N104 65 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 ZNF276Q8N554 614 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 WDTC1Q8N5D0 677 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 DQX1Q8TE96 717 aaKnown RBP9.36□□□□□ -0.91
SPG11-207ENST00000558138 PNKPQ96T60 521 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 DDX50Q9BQ39 737 aaKnown RBP9.36□□□□□ -0.91
SPG11-207ENST00000558138 C11orf70Q9BRQ4 267 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 DDIT4Q9NX09 232 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 PLK2Q9NYY3 685 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 WDR35Q9P2L0 1181 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 DEC1Q9P2X7 70 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 AGO1Q9UL18 857 aaKnown RBP9.36□□□□□ -0.91
SPG11-207ENST00000558138 STAP1Q9ULZ2 295 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 SLC8A2Q9UPR5 921 aa9.36□□□□□ -0.91
SPG11-207ENST00000558138 ANKRD62A6NC57 917 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 TMCO5BA8MYB1 307 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 ATG13O75143 517 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 RNF40O75150 1001 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 DAB1O75553 588 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 GABBR2O75899 941 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 TRUB2O95900 331 aaKnown RBP9.35□□□□□ -0.91
SPG11-207ENST00000558138 GLI1P08151 1106 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 CHRNB1P11230 501 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 ABCB4P21439 1286 aa9.35□□□□□ -0.91
SPG11-207ENST00000558138 RPS9P46781 194 aaKnown RBP9.35□□□□□ -0.91
SPG11-207ENST00000558138 SLC6A11P48066 632 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms