RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 RAB17Q9H0T7 212 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 HOMER3Q9NSC5 361 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 GMIPQ9P107 970 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 RASAL2Q9UJF2 1139 aa21.22■□□□□ 0.99
SNRPA1-205ENST00000558036 LCHNA4D1U4 455 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 SASH3O75995 380 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 MAP3K6O95382 1288 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 LINC00271P0C7V0 271 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 TNNT3P45378 269 aaPredicted RBP21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 HTRA4P83105 476 aaPredicted RBP21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 ATL2Q8NHH9 583 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 SEC14L1Q92503 715 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 ABCC13Q9NSE7 274 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 SFMBT1Q9UHJ3 866 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 SCML2Q9UQR0 700 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 ZNF148Q9UQR1 794 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 CHD9Q3L8U1 2897 aa21.21■□□□□ 0.99
SNRPA1-205ENST00000558036 MSI1O43347 362 aaKnown RBP21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 CSPG5O95196 566 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 GOT1P17174 413 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 RPL21P46778 160 aaKnown RBP21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 C1orf228Q6PIY5 440 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 DDX53Q86TM3 631 aaKnown RBP21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 FIBCD1Q8N539 461 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 CWC15Q9P013 229 aaKnown RBP21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 SEC24AO95486 1093 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 URODP06132 367 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 VPS41P49754 854 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 SMARCB1Q12824 385 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 MAP9Q49MG5 647 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 PSRC1Q6PGN9 363 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 GSTA5Q7RTV2 222 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 GLIS1Q8NBF1 620 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 FAM71BQ8TC56 605 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 CASP10Q92851 521 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 PGAP3Q96FM1 320 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 RUNDC3BQ96NL0 473 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 ZNF670Q9BS34 389 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 TMEM121Q9BTD3 319 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 HERC2P3Q9BVR0 1158 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 FUT8Q9BYC5 575 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 FBXO44Q9H4M3 255 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 MAGED2Q9UNF1 606 aaPredicted RBP21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 PCDHB12Q9Y5F1 795 aa21.2■□□□□ 0.98
SNRPA1-205ENST00000558036 FAM72CH0Y354 149 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 APOC4-APOC2K7ER74 178 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 FGF18O76093 207 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 APOC2P02655 101 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 ADRA1BP35368 520 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 TAF10Q12962 218 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 FAM182AQ5T1J6 154 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 FAM72AQ5TYM5 149 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 FAM72DQ6L9T8 149 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 FAM72BQ86X60 149 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 PLD5Q8N7P1 536 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 C2orf15Q8WU43 125 aaKnown RBP21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 SLCO2A1Q92959 643 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 FBXO32Q969P5 355 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 CSPG4P5Q96PW8 444 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 FBXW11Q9UKB1 542 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 INSL6Q9Y581 213 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 HEY1Q9Y5J3 304 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 SLC4A7Q9Y6M7 1214 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 CREB3O43889 395 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 YWHAQP27348 245 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 CA8P35219 290 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 GGCXP38435 758 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 VCPP55072 806 aaKnown RBP21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 CUL1Q13616 776 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 OASLQ15646 514 aaKnown RBP21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 SND1Q7KZF4 910 aaKnown RBP eCLIP21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 MON1AQ86VX9 555 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 HERC6Q8IVU3 1022 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 CCDC33Q8N5R6 958 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 SLC35B2Q8TB61 432 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 LRRN4Q8WUT4 740 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 WDCPQ9H6R7 721 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 RRN3Q9NYV6 651 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 ASIC3Q9UHC3 531 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 MFHAS1Q9Y4C4 1052 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 SNX10Q9Y5X0 201 aa21.19■□□□□ 0.98
SNRPA1-205ENST00000558036 ETS1P14921 441 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 TFDP2Q14188 446 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 EFHC2Q5JST6 749 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 ZC3H18Q86VM9 953 aaKnown RBP21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 ZNF461Q8TAF7 563 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 GRK7Q8WTQ7 553 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 RNF34Q969K3 372 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 FAF2Q96CS3 445 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 TKTL2Q9H0I9 626 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 ETNK2Q9NVF9 386 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 IL37Q9NZH6 218 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 NEU2Q9Y3R4 380 aa21.18■□□□□ 0.98
SNRPA1-205ENST00000558036 APOL1O14791 398 aa21.17■□□□□ 0.98
SNRPA1-205ENST00000558036 GAS8O95995 478 aa21.17■□□□□ 0.98
SNRPA1-205ENST00000558036 ZSCAN5DPP0CG00 497 aa21.17■□□□□ 0.98
SNRPA1-205ENST00000558036 ATP2A2P16615 1042 aaKnown RBP21.17■□□□□ 0.98
SNRPA1-205ENST00000558036 CXCR3P49682 368 aa21.17■□□□□ 0.98
SNRPA1-205ENST00000558036 KLHL23Q8NBE8 558 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms