RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MAP3K21Q5TCX8 1036 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 DGAT2L7PQ6IED9 249 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 LVRNQ6Q4G3 990 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PIK3AP1Q6ZUJ8 805 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 TTC30AQ86WT1 665 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF354CQ86Y25 554 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SIRT6Q8N6T7 355 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 C12orf76Q8N812 135 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PTGR2Q8N8N7 351 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PTCD3Q96EY7 689 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF845Q96IR2 970 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 HAPLN3Q96S86 360 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 MLST8Q9BVC4 326 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 TPSD1Q9BZJ3 242 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 VPS16Q9H269 839 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ERVK-5Q9HDB9 667 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ARHGEF3Q9NR81 526 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 TBC1D23Q9NUY8 699 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CD207Q9UJ71 328 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PACSIN3Q9UKS6 424 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 MAGED2Q9UNF1 606 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 MRPS17Q9Y2R5 130 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 H0YIZ8 118 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 NBNO60934 754 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 VPS4BO75351 444 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CHRM5P08912 532 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 TMEM225BP0DP42 221 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 TACR2P21452 398 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ADORA2AP29274 412 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CTGFP29279 349 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 LIPAP38571 399 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ARL1P40616 181 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PRICKLE4Q2TBC4 344 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ADCK5Q3MIX3 580 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 LCE5AQ5TCM9 118 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 HECTD2Q5U5R9 776 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CACHD1Q5VU97 1274 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SLC9A4Q6AI14 798 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ANO7Q6IWH7 933 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CAND1Q86VP6 1230 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 METTL25Q8N6Q8 603 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 LARP4BQ92615 738 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SH3KBP1Q96B97 665 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 EVI5LQ96CN4 794 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PHACTR3Q96KR7 559 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SEMA4CQ9C0C4 833 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CDCP1Q9H5V8 836 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ITIH6Q6UXX5 1313 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PNMA6EA0A0J9YXQ4 647 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 C3orf70A6NLC5 250 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SLC38A8A6NNN8 435 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 H0Y3Z8 333 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 EXOC5O00471 708 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ASNA1O43681 348 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 URI1O94763 535 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CHRM3P20309 590 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PAPOLAP51003 745 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ZNF84P51523 738 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CHRNDQ07001 517 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 FOXI1Q12951 378 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SEMA3BQ13214 749 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 MAPRE1Q15691 268 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 DEF8Q6ZN54 512 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SUPT20HQ8NEM7 779 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ASB12Q8WXK4 309 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 FAR2Q96K12 515 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PPP1R10Q96QC0 940 aaKnown RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PRR25Q96S07 402 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 PAGR1Q9BTK6 254 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CINPQ9BW66 212 aaPredicted RBP1.97□□□□□ -2.09
HIF1A-212ENST00000557538 ANKFY1Q9P2R3 1169 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 SERTAD3Q9UJW9 196 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 AMFRQ9UKV5 643 aa1.97□□□□□ -2.09
HIF1A-212ENST00000557538 CENPJQ9HC77 1338 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 AQP12BA6NM10 295 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 B8ZZF3 427 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PRRT4C9JH25 899 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PSMD9O00233 223 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PPM1DO15297 605 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 JTBO76095 146 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 RASAL1O95294 804 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 LMNAP02545 664 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 APEHP13798 732 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SUMO2P61956 95 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 GPC5P78333 572 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 TBCCQ15814 346 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 BAK1Q16611 211 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PREPLQ4J6C6 727 aaPredicted RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 TREML2Q5T2D2 321 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 RRAGBQ5VZM2 374 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 CEP85Q6P2H3 762 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 MMS22LQ6ZRQ5 1243 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 PCSK9Q8NBP7 692 aaKnown RBP1.96□□□□□ -2.1
HIF1A-212ENST00000557538 NAXEQ8NCW5 288 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 ABHD11Q8NFV4 315 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SCAMP5Q8TAC9 235 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 SARAFQ96BY9 339 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 HIC2Q96JB3 615 aa1.96□□□□□ -2.1
HIF1A-212ENST00000557538 UBXN10Q96LJ8 280 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms