RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TRIM68Q6AZZ1 485 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 PM20D1Q6GTS8 502 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 DENND1BQ6P3S1 775 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 FAM71AQ8IYT1 594 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 SCML4Q8N228 414 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 ZNF276Q8N554 614 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 DTWD2Q8NBA8 298 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 TMEM35BQ8NCS4 154 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 MRGPRX2Q96LB1 330 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 LRRC3BQ96PB8 259 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 FAM83CQ9BQN1 747 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 DDX23Q9BUQ8 820 aaKnown RBP8.72□□□□□ -1.01
PSEN1-223ENST00000557511 FOXQ1Q9C009 403 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 NMUR1Q9HB89 426 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 SIX2Q9NPC8 291 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 NLRC4Q9NPP4 1024 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 SPATA6Q9NWH7 488 aaPredicted RBP8.72□□□□□ -1.01
PSEN1-223ENST00000557511 MARCH2Q9P0N8 246 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 FHOD1Q9Y613 1164 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 VCANP13611 3396 aa8.72□□□□□ -1.01
PSEN1-223ENST00000557511 NOTCH4Q99466 2003 aa8.71□□□□□ -1.01
PSEN1-223ENST00000557511 DOCK8Q8NF50 2099 aa8.71□□□□□ -1.01
PSEN1-223ENST00000557511 FAM187AA6NFU0 413 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 PIK3R2O00459 728 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 ATG13O75143 517 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 TBX18O95935 607 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 LTFP02788 710 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 HMBSP08397 361 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 ADH5P11766 374 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 ARSAP15289 507 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 ZNF18P17022 549 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 DRD1P21728 446 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 TARSP26639 723 aaKnown RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 CHKAP35790 457 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 GPD2P43304 727 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 RPS9P46781 194 aaKnown RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 SOX9P48436 509 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 DAOAP59103 153 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 SH3BP2P78314 561 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 SKOR1P84550 965 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 APBA1Q02410 837 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 NCAPHQ15003 741 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 PON2Q15165 354 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 ANO4Q32M45 955 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 EML3Q32P44 896 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 FBXO43Q4G163 708 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 TMEM259Q4ZIN3 620 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 PMF1Q6P1K2 205 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 TOGARAM2Q6ZUX3 1019 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 HTR3DQ70Z44 454 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 SCD5Q86SK9 330 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 ZNF677Q86XU0 584 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 PASD1Q8IV76 773 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 CCDC117Q8IWD4 279 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 DHX40Q8IX18 779 aaKnown RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 CCDC105Q8IYK2 499 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 SYNPOQ8N3V7 929 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 TMEM105Q8N8V8 129 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 CD101Q93033 1021 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 PLD4Q96BZ4 506 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 PPP1R13BQ96KQ4 1090 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 SERPINB11Q96P15 392 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 XPO6Q96QU8 1125 aaKnown RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 ERGIC2Q96RQ1 377 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 P2RY13Q9BPV8 354 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 KLF16Q9BXK1 252 aaPredicted RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 LHX5Q9H2C1 402 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 LMAN1LQ9HAT1 526 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 CBX8Q9HC52 389 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 HPS4Q9NQG7 708 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 SEPT11Q9NVA2 429 aaKnown RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 NUDT5Q9UKK9 219 aa8.71□□□□□ -1.02
PSEN1-223ENST00000557511 HBS1LQ9Y450 684 aaKnown RBP8.71□□□□□ -1.02
PSEN1-223ENST00000557511 TYW5A2RUC4 315 aaKnown RBP8.7□□□□□ -1.02
PSEN1-223ENST00000557511 F8VZ95 297 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 ARNTLO00327 626 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 MDM4O15151 490 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 CBFA2T2O43439 604 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 PI15O43692 258 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 GFPT2O94808 682 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 LSM8O95777 96 aaKnown RBP8.7□□□□□ -1.02
PSEN1-223ENST00000557511 CALCAP01258 141 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 APODP05090 189 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 NCAM1P13591 858 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 ATP1A3P13637 1013 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 CYP11B1P15538 503 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 DESP17661 470 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 CORO1AP31146 461 aaKnown RBP8.7□□□□□ -1.02
PSEN1-223ENST00000557511 GBP1P32455 592 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 GJA4P35212 333 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 SOX5P35711 763 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 UBASH3AP57075 661 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 PDCLQ13371 301 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 DHCR24Q15392 516 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 EFHC1Q5JVL4 640 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 TAF3Q5VWG9 929 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 OR6B2Q6IFH4 312 aa8.7□□□□□ -1.02
PSEN1-223ENST00000557511 SLC47A2Q86VL8 602 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms