RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 CNOT1A5YKK6 2376 aaKnown RBP16.61■□□□□ 0.25
TUBB3-214ENST00000557490 F5P12259 2224 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 MYO16Q9Y6X6 1858 aa16.61■□□□□ 0.25
TUBB3-214ENST00000557490 SLC12A8A0AV02 714 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 DCDC2BA2VCK2 349 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 HMBSP08397 361 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 ADH5P11766 374 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 ATP1A3P13637 1013 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 DRD1P21728 446 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 RPL34P49207 117 aaKnown RBP16.6■□□□□ 0.25
TUBB3-214ENST00000557490 KLK7P49862 253 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 POLR2FP61218 127 aaKnown RBP16.6■□□□□ 0.25
TUBB3-214ENST00000557490 MTAPQ13126 283 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 FSTL4Q6MZW2 842 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 NEK11Q8NG66 645 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 CHFRQ96EP1 664 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 SLC4A5Q9BY07 1137 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 DCLK3Q9C098 648 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 GANQ9H2C0 597 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 LHX5Q9H2C1 402 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 RBM12Q9NTZ6 932 aaKnown RBP16.6■□□□□ 0.25
TUBB3-214ENST00000557490 CDV3Q9UKY7 258 aaKnown RBP16.6■□□□□ 0.25
TUBB3-214ENST00000557490 SIK3Q9Y2K2 1263 aa16.6■□□□□ 0.25
TUBB3-214ENST00000557490 HELZP42694 1942 aaKnown RBP16.6■□□□□ 0.25
TUBB3-214ENST00000557490 F8VZ95 297 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 GREM1O60565 184 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 STC2O76061 302 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 LTFP02788 710 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 SNX16P57768 344 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 TPM4P67936 248 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 GAD2Q05329 585 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 PDCLQ13371 301 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 CCINQ13939 588 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 FILIP1LQ4L180 1135 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 LY6G5CQ5SRR4 150 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 APTXQ7Z2E3 356 aaKnown RBP16.59■□□□□ 0.25
TUBB3-214ENST00000557490 TMEM110Q86TL2 294 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 PASD1Q8IV76 773 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 FMNL3Q8IVF7 1028 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 SCUBE3Q8IX30 993 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 CLEC4CQ8WTT0 213 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 SPAG5Q96R06 1193 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 ERGIC2Q96RQ1 377 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 TRIM62Q9BVG3 475 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 SPHK2Q9NRA0 654 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 NCDNQ9UBB6 729 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 HBS1LQ9Y450 684 aaKnown RBP16.59■□□□□ 0.25
TUBB3-214ENST00000557490 FRYQ5TBA9 3013 aa16.59■□□□□ 0.25
TUBB3-214ENST00000557490 E5RJQ4 531 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 CAVIN2O95810 425 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 EGFP01133 1207 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 CYP11B1P15538 503 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 CORO1AP31146 461 aaKnown RBP16.58■□□□□ 0.24
TUBB3-214ENST00000557490 PPP2R5DQ14738 602 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 ACAP1Q15027 740 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 ANO4Q32M45 955 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 ZSCAN23Q3MJ62 389 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 FBXO43Q4G163 708 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 NAIF1Q69YI7 327 aaPredicted RBP16.58■□□□□ 0.24
TUBB3-214ENST00000557490 MAMSTRQ6ZN01 415 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 Q6ZNB5 142 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 FAM149B1Q96BN6 582 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 PLD4Q96BZ4 506 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 PPP1R13BQ96KQ4 1090 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 RTKNQ9BST9 563 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 CYTH4Q9UIA0 394 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 FBXO4Q9UKT5 387 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 MIA3Q5JRA6 1907 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 SETXQ7Z333 2677 aaKnown RBP16.58■□□□□ 0.24
TUBB3-214ENST00000557490 ASPMQ8IZT6 3477 aa16.58■□□□□ 0.24
TUBB3-214ENST00000557490 PRR5-ARHGAP8B1AHC4 643 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 HOXC11O43248 304 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 PAPSS1O43252 624 aaPredicted RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 SOX5P35711 763 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 OPRD1P41143 372 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 STAT1P42224 750 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 HARS2P49590 506 aaKnown RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 CCR3P51677 355 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 ARHGAP8P85298 464 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 LMNB2Q03252 620 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 CSTF1Q05048 431 aaKnown RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 IQCB1Q15051 598 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 GAB4Q2WGN9 574 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 MSANTD2Q6P1R3 559 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 Q6ZS52 159 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 TMEM25Q86YD3 366 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 SPEM1Q8N4L4 309 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 WDTC1Q8N5D0 677 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 GPR161Q8N6U8 529 aaKnown RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 C1orf131Q8NDD1 294 aaKnown RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 CCDC26Q8TAB7 109 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 IPO4Q8TEX9 1081 aaKnown RBP16.57■□□□□ 0.24
TUBB3-214ENST00000557490 PNKPQ96T60 521 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
TUBB3-214ENST00000557490 CBX8Q9HC52 389 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms