RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CCDC157Q569K6 752 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 TMEM215Q68D42 235 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 PRCCQ92733 491 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-221ENST00000557293 ELMO3Q96BJ8 720 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 PCED1AQ9H1Q7 454 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 NMUR1Q9HB89 426 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 CSNK1G1Q9HCP0 422 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 TM9SF3Q9HD45 589 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-221ENST00000557293 PANK4Q9NVE7 773 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 HSPBP1Q9NZL4 362 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 NUDT5Q9UKK9 219 aa13.24□□□□□ -0.29
PSEN1-221ENST00000557293 A0A087X0B3 334 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 HHLA1C9JL84 531 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 PAPSS1O43252 624 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-221ENST00000557293 TGFB1I1O43294 461 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 AP1G2O75843 785 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 STC2O76061 302 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 HLA-EP13747 358 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 IDEP14735 1019 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 PRKCHP24723 683 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 GJB2P29033 226 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 CTSKP43235 329 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 GRK6P43250 576 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 AFF3P51826 1226 aaKnown RBP13.23□□□□□ -0.29
PSEN1-221ENST00000557293 PSMD6Q15008 389 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 LAYNQ6UX15 382 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 GPRIN1Q7Z2K8 1008 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 FAM124AQ86V42 546 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 RDH13Q8NBN7 331 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 IGSF8Q969P0 613 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 CGRRF1Q99675 332 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 SMYD3Q9H7B4 428 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 ELOVL2Q9NXB9 296 aa13.23□□□□□ -0.29
PSEN1-221ENST00000557293 NXF1Q9UBU9 619 aaKnown RBP13.23□□□□□ -0.29
PSEN1-221ENST00000557293 FBXO2Q9UK22 296 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-221ENST00000557293 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.23□□□□□ -0.29
PSEN1-221ENST00000557293 MUC22E2RYF6 1773 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-221ENST00000557293 CKAP5Q14008 2032 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 CBX4O00257 560 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 NPC1O15118 1278 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 TSPAN3O60637 253 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 BMP15O95972 392 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 DLATP10515 647 aaKnown RBP13.22□□□□□ -0.29
PSEN1-221ENST00000557293 TNNI1P19237 187 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 PLA2G4AP47712 749 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 GRIA4P48058 902 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 TNNC1P63316 161 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 RTP5Q14D33 572 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 RRAGBQ5VZM2 374 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 SCD5Q86SK9 330 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 CRYBG2Q8N1P7 616 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 PLEKHO2Q8TD55 490 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 SORCS1Q8WY21 1168 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 BIRC7Q96CA5 298 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 PANK2Q9BZ23 570 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 NACA2Q9H009 215 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 VRTNQ9H8Y1 702 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 KIAA1586Q9HCI6 787 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
PSEN1-221ENST00000557293 TLR8Q9NR97 1041 aaKnown RBP13.22□□□□□ -0.29
PSEN1-221ENST00000557293 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
PSEN1-221ENST00000557293 SCML2Q9UQR0 700 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
PSEN1-221ENST00000557293 H3BQV1 296 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 CCDC130P13994 396 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 JUPP14923 745 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 ATICP31939 592 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 MAP3K7CLP57077 242 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 IL9RQ01113 521 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 SEMG2Q02383 582 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 CYP24A1Q07973 514 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 CAMK2GQ13555 558 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-221ENST00000557293 SHBQ15464 509 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 SNRNP35Q16560 246 aaKnown RBP13.21□□□□□ -0.29
PSEN1-221ENST00000557293 PRAMEF14Q5SWL7 426 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 KLHDC10Q6PID8 442 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 EPM2AIP1Q7L775 607 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-221ENST00000557293 CACUL1Q86Y37 369 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 FCRL3Q96P31 734 aaPredicted RBP13.21□□□□□ -0.29
PSEN1-221ENST00000557293 FBXO44Q9H4M3 255 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 KRT82Q9NSB4 513 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 LSM7Q9UK45 103 aaKnown RBP13.21□□□□□ -0.29
PSEN1-221ENST00000557293 PCDHGA1Q9Y5H4 931 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.29
PSEN1-221ENST00000557293 MYH10P35580 1976 aa13.21□□□□□ -0.29
PSEN1-221ENST00000557293 ATP8B3O60423 1300 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 A0A1W2PQH9 124 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 J3QKU1 62 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 CYP26A1O43174 497 aa13.2□□□□□ -0.3
PSEN1-221ENST00000557293 SYNCRIPO60506 623 aaKnown RBP13.2□□□□□ -0.3
PSEN1-221ENST00000557293 ACADMP11310 421 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms