RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 SMC2O95347 1197 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 MATN4O95460 622 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 A1BGP04217 495 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 SLC3A2P08195 630 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 FTH1P19P0C7X4 201 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 GATA3P23771 443 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 CMA1P23946 247 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 MC2RQ01718 297 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 TFCP2Q12800 502 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 PLS1Q14651 629 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 STK38Q15208 465 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 PWP2Q15269 919 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 CD300EQ496F6 205 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 PREPLQ4J6C6 727 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 CCDC158Q5M9N0 1113 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 TOM1L2Q6ZVM7 507 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 ADGRG3Q86Y34 549 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 PDSS2Q86YH6 399 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 CFAP52Q8N1V2 620 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 CELF5Q8N6W0 485 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 C1GALT1C1Q96EU7 318 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 EDC3Q96F86 508 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF764Q96H86 408 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 TCEANC2Q96MN5 208 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 AIFM3Q96NN9 605 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 USP28Q96RU2 1077 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 ACO2Q99798 780 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 SMOQ99835 787 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 AIFM2Q9BRQ8 373 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 GOLPH3LQ9H4A5 285 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 GPR108Q9NPR9 543 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 CASS4Q9NQ75 786 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 TRMT1Q9NXH9 659 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 HOOK1Q9UJC3 728 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 DBNLQ9UJU6 430 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 TRPC5Q9UL62 973 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 AGAP1Q9UPQ3 857 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 STXBP5LQ9Y2K9 1186 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 NEU2Q9Y3R4 380 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 AFDNP55196 1824 aaKnown RBP5.22□□□□□ -1.57
ATXN3-246ENST00000557030 NHSL1Q5SYE7 1610 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 ZNF609O15014 1411 aa5.22□□□□□ -1.57
ATXN3-246ENST00000557030 KAT6AQ92794 2004 aa5.21□□□□□ -1.57
ATXN3-246ENST00000557030 CARMIL3Q8ND23 1372 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 TRGV11A0A075B6L2 103 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CCDC195A0A1B0GUA6 201 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 GOLGA6CA6NDK9 693 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 GOLGA6BA6NDN3 693 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 E7ENX8 843 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 POLRMTO00411 1230 aaKnown RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 SPTLC2O15270 562 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 PRC1O43663 620 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 PEX14O75381 377 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 C1QL1O75973 258 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CYP21A2P08686 494 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 GOLGA6DP0CG33 693 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 PNMA6AP0CW24 399 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CHRM3P20309 590 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CXCR5P32302 372 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 EVCP57679 992 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 MYL5Q02045 173 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 TAP2Q03519 686 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CEBPZQ03701 1054 aaKnown RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 TCF15Q12870 199 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 TUBB2AQ13885 445 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 GTF2H3Q13889 308 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 GFOD2Q3B7J2 385 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 ARHGAP29Q52LW3 1261 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 TAPT1Q6NXT6 567 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 VWA1Q6PCB0 445 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 OLFM4Q6UX06 510 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 SYT10Q6XYQ8 523 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 SYNE3Q6ZMZ3 975 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 ATG9AQ7Z3C6 839 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CLNKQ7Z7G1 428 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 DENND1CQ8IV53 801 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 LINC00301Q8NCQ3 95 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 SLC35G2Q8TBE7 412 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 BRIX1Q8TDN6 353 aaKnown RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 SCAMP4Q969E2 229 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 PTCD3Q96EY7 689 aaKnown RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CDK5RAP3Q96JB5 506 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 C8orf76Q96K31 380 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 TRIB1Q96RU8 372 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 ISCA1Q9BUE6 129 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 TUBB2BQ9BVA1 445 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 XPO4Q9C0E2 1151 aaKnown RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 RLIMQ9NVW2 624 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 GOLGA6AQ9NYA3 693 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CWC15Q9P013 229 aaKnown RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 IFNKQ9P0W0 207 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 ORC3Q9UBD5 711 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-246ENST00000557030 CPA4Q9UI42 421 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 PCDHA7Q9UN72 937 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 PCDHA6Q9UN73 950 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 INSL6Q9Y581 213 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 DISP2A7MBM2 1401 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 MAP3K15Q6ZN16 1313 aa5.21□□□□□ -1.58
ATXN3-246ENST00000557030 WDR19Q8NEZ3 1342 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms