RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
PSEN1-219ENST00000556951 ANKMY1Q9P2S6 941 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
PSEN1-219ENST00000556951 IL17BQ9UHF5 180 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 EXOC7Q9UPT5 735 aa13.46□□□□□ -0.25
PSEN1-219ENST00000556951 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 TCRBV21S2A2A0A5A6 115 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 SCAMP3O14828 347 aaKnown RBP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 TGFB1I1O43294 461 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 CBFA2T3O75081 653 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 OLFM2O95897 454 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 NR3C1P04150 777 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 GRIA2P42262 883 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 MAGEA11P43364 429 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 ATXN3P54252 364 aaPredicted RBP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 KCNA1Q09470 495 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 LIMS2Q7Z4I7 341 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 VSTM4Q8IW00 320 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 SCN4BQ8IWT1 228 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 C1orf127Q8N9H9 656 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 SPC24Q8NBT2 197 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 TMEM174Q8WUU8 243 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 TRIM44Q96DX7 344 aaPredicted RBP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 WBP1Q96G27 269 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 TUBGCP2Q9BSJ2 902 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 GDAP2Q9NXN4 497 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 TAB2Q9NYJ8 693 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 BCCIPQ9P287 314 aaKnown RBP eCLIP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 AGO2Q9UKV8 859 aaKnown RBP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
PSEN1-219ENST00000556951 APOBEC2Q9Y235 224 aaKnown RBP13.45□□□□□ -0.26
PSEN1-219ENST00000556951 IGHV1OR15-9A0A0B4J2B8 117 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 ZNF840PA6NDX5 716 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 APODP05090 189 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 PFKLP17858 780 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 NR2F2P24468 414 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 LMO2P25791 158 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 POLR2BP30876 1174 aaKnown RBP13.44□□□□□ -0.26
PSEN1-219ENST00000556951 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
PSEN1-219ENST00000556951 SLC14A1Q13336 389 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 TAF1BQ53T94 588 aaPredicted RBP13.44□□□□□ -0.26
PSEN1-219ENST00000556951 LRRC69Q6ZNQ3 347 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 MIB1Q86YT6 1006 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 SLC9A9Q8IVB4 645 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 ETFBKMTQ8IXQ9 262 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 PGBD3Q8N328 593 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 FUBP3Q96I24 572 aaKnown RBP eCLIP13.44□□□□□ -0.26
PSEN1-219ENST00000556951 SPATA17Q96L03 361 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 SEMA4CQ9C0C4 833 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 VPS16Q9H269 839 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 ARHGEF4Q9NR80 690 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 INTS13Q9NVM9 706 aa13.44□□□□□ -0.26
PSEN1-219ENST00000556951 A0A1W2PQF6 199 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 LGALS16A8MUM7 142 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 SLC16A3O15427 465 aaKnown RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 ITGB3P05106 788 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 C6P13671 934 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 EIF2S3P41091 472 aaKnown RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 PNPLA4P41247 253 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 MYL7Q01449 175 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 KDSRQ06136 332 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 SOWAHAQ2M3V2 549 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 CCDC40Q4G0X9 1142 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 LY6G5CQ5SRR4 150 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 SLFN12LQ6IEE8 588 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 SLC36A4Q6YBV0 504 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 TMC6Q7Z403 805 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 GLRX5Q86SX6 157 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 NT5DC4Q86YG4 428 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 SPATA2LQ8IUW3 424 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 FMNL3Q8IVF7 1028 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 C12orf56Q8IXR9 622 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 TMEM86AQ8N2M4 240 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 ZNF419Q96HQ0 510 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 ZNF560Q96MR9 790 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 METTL14Q9HCE5 456 aaKnown RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 CRTAC1Q9NQ79 661 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 AGPAT3Q9NRZ7 376 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 DMAC2Q9NW81 257 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 SMPD4Q9NXE4 827 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 CALCOCO1Q9P1Z2 691 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 KIAA1522Q9P206 1035 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 SIX4Q9UIU6 781 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 PCDHB9Q9Y5E1 797 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 CPQQ9Y646 472 aa13.43□□□□□ -0.26
PSEN1-219ENST00000556951 UTP20O75691 2785 aaKnown RBP13.43□□□□□ -0.26
PSEN1-219ENST00000556951 LRRK2Q5S007 2527 aa13.42□□□□□ -0.26
PSEN1-219ENST00000556951 TRIM24O15164 1050 aa13.42□□□□□ -0.26
PSEN1-219ENST00000556951 CLIC2O15247 247 aa13.42□□□□□ -0.26
PSEN1-219ENST00000556951 TEX33O43247 280 aa13.42□□□□□ -0.26
PSEN1-219ENST00000556951 HUS1O60921 280 aa13.42□□□□□ -0.26
PSEN1-219ENST00000556951 IL18RAPO95256 599 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms