RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 RTP2Q5QGT7 225 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ALG1LQ6GMV1 187 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 LLGL2Q6P1M3 1020 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 DENND1BQ6P3S1 775 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 PRSS55Q6UWB4 352 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 BEND4Q6ZU67 534 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ENOSF1Q7L5Y1 443 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ASCL5Q7RTU5 278 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 LRRTM3Q86VH5 581 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CEP57Q86XR8 500 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SHISA5Q8N114 240 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TOP6BLQ8N6T0 577 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 EFHBQ8N7U6 833 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SMRP1Q8NCR6 262 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 APPL2Q8NEU8 664 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF397Q8NF99 534 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 OR10T2Q8NGX3 314 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 UBA3Q8TBC4 463 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 DDX1Q92499 740 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ASIC4Q96FT7 647 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM176AQ96HP8 235 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 IGSF21Q96ID5 467 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 RPGRIP1Q96KN7 1286 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 HEXIM2Q96MH2 286 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 RIPOR3Q96MK2 946 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 AGPAT1Q99943 283 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM175Q9BSA9 504 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SYT11Q9BT88 431 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 PACSIN1Q9BY11 444 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 RHOBTB2Q9BYZ6 727 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SNX25Q9H3E2 840 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CYP3A43Q9HB55 503 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SEPT11Q9NVA2 429 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 DDX43Q9NXZ2 648 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CLEC1BQ9P126 229 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TJP2Q9UDY2 1190 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CYTH4Q9UIA0 394 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 NOCTQ9UK39 431 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ADAM28Q9UKQ2 775 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SOX13Q9UN79 622 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CNTN6Q9UQ52 1028 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 PCDHGC5Q9Y5F6 944 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 FNDC1Q4ZHG4 1894 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CITO14578 2027 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SCN1AP35498 2009 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TTC3P53804 2025 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 A0A087X0T9 212 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 PRR23AA6NEV1 266 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 USP27XA6NNY8 438 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TMEM189-UBE2V1I3L0A0 370 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TULP2O00295 520 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 GABRDO14764 452 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TACC1O75410 805 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 BEST1O76090 585 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 GJB6O95452 261 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 VNN2O95498 520 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 FAM228BP0C875 321 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 ODC1P11926 461 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 P4HA1P13674 534 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 PTPN1P18031 435 aaKnown RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TNFAIP3P21580 790 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 DNAJB1P25685 340 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 ADORA2BP29275 332 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 GRIK1P39086 918 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 PRKCIP41743 596 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 PDE6CP51160 858 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 KIF11P52732 1056 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 CACNA2D1P54289 1103 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 ARPP19P56211 112 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 CAMK1Q14012 370 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 GRM2Q14416 872 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 GOLGA7BQ2TAP0 167 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 MDH1BQ5I0G3 518 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 OVOS1Q6IE37 1185 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 CYP26C1Q6V0L0 522 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 PAQR9Q6ZVX9 377 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TTC30AQ86WT1 665 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 TMTC1Q8IUR5 882 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 RNF168Q8IYW5 571 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 WDTC1Q8N5D0 677 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 STKLD1Q8NE28 680 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 SLC30A5Q8TAD4 765 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 SPPL3Q8TCT6 385 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 EPS8L3Q8TE67 593 aaKnown RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF606Q8WXB4 792 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 SYN2Q92777 582 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 NKD2Q969F2 451 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-244ENST00000556898 MYLPFQ96A32 169 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 JAKMIP2Q96AA8 810 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 IQCDQ96DY2 449 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 CYFIP2Q96F07 1278 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF558Q96NG5 402 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 PKMYT1Q99640 499 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 SYT15Q9BQS2 421 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 NT5C1AQ9BXI3 368 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 B3GNT5Q9BYG0 378 aa5.61□□□□□ -1.51
ATXN3-244ENST00000556898 LIN7BQ9HAP6 207 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms