RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.55■■□□□ 1.368e-11■■■□□ 16.3
PABPN1-206ENST00000556809 KIAA1549LQ6ZVL6 1849 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 E5RJQ4 531 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 LSM8O95777 96 aaKnown RBP23.54■■□□□ 1.36
PABPN1-206ENST00000556809 EGFP01133 1207 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 GYPCP04921 128 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 RALAP11233 206 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 TDGF1P13385 188 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 CHRNB2P17787 502 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 OPRD1P41143 372 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 DAOAP59103 153 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 YWHAGP61981 247 aaKnown RBP eCLIP23.54■■□□□ 1.36
PABPN1-206ENST00000556809 FMO1Q01740 532 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 GRSF1Q12849 480 aaKnown RBP eCLIP23.54■■□□□ 1.36
PABPN1-206ENST00000556809 ASIC2Q16515 512 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 SFMBT2Q5VUG0 894 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 IRF2BP2Q7Z5L9 587 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 TMEM110Q86TL2 294 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 VSTM4Q8IW00 320 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 SPEM1Q8N4L4 309 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 ZNF397Q8NF99 534 aaPredicted RBP23.54■■□□□ 1.36
PABPN1-206ENST00000556809 IRGQQ8WZA9 623 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 CD101Q93033 1021 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 PPP1R13BQ96KQ4 1090 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 CDK5RAP1Q96SZ6 601 aaKnown RBP23.54■■□□□ 1.36
PABPN1-206ENST00000556809 MIS12Q9H081 205 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 AIPL1Q9NZN9 384 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 CAPN11Q9UMQ6 739 aa23.54■■□□□ 1.36
PABPN1-206ENST00000556809 IRF1P10914 325 aa23.53■■□□□ 1.36
PABPN1-206ENST00000556809 DRD1P21728 446 aa23.53■■□□□ 1.36
PABPN1-206ENST00000556809 CSTF1Q05048 431 aaKnown RBP23.53■■□□□ 1.36
PABPN1-206ENST00000556809 TADA2BQ86TJ2 420 aa23.53■■□□□ 1.36
PABPN1-206ENST00000556809 SCUBE3Q8IX30 993 aa23.53■■□□□ 1.36
PABPN1-206ENST00000556809 CPLX3Q8WVH0 158 aa23.53■■□□□ 1.36
PABPN1-206ENST00000556809 CPXM1Q96SM3 734 aa23.53■■□□□ 1.36
PABPN1-206ENST00000556809 NUCKS1Q9H1E3 243 aaKnown RBP23.53■■□□□ 1.36
PABPN1-206ENST00000556809 ATG2BQ96BY7 2078 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 YJEFN3A6XGL0 299 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 E7ENQ6 273 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 MRE11P49959 708 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 NOMO3P69849 1222 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 ZBED6P86452 979 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 PTPN20Q4JDL3 420 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 LY6G5CQ5SRR4 150 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 E4F1Q66K89 784 aaPredicted RBP23.52■■□□□ 1.36
PABPN1-206ENST00000556809 TRIM72Q6ZMU5 477 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 Q6ZNB5 142 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 ALYREFQ86V81 257 aaKnown RBP23.52■■□□□ 1.36
PABPN1-206ENST00000556809 CLEC4CQ8WTT0 213 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 AGPAT1Q99943 283 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 C2orf42Q9NWW7 574 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 TJP2Q9UDY2 1190 aa23.52■■□□□ 1.36
PABPN1-206ENST00000556809 LUC7L2Q9Y383 392 aaKnown RBP23.52■■□□□ 1.36
PABPN1-206ENST00000556809 PAPSS1O43252 624 aaPredicted RBP23.51■■□□□ 1.35
PABPN1-206ENST00000556809 SART1O43290 800 aaKnown RBP23.51■■□□□ 1.35
PABPN1-206ENST00000556809 STC2O76061 302 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 PAPSS2O95340 614 aaPredicted RBP23.51■■□□□ 1.35
PABPN1-206ENST00000556809 CYP1A1P04798 512 aaPredicted RBP23.51■■□□□ 1.35
PABPN1-206ENST00000556809 CCR3P51677 355 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 SNX16P57768 344 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 SATB1Q01826 763 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 TRIM14Q14142 442 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 NAA35Q5VZE5 725 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 BSPRYQ5W0U4 402 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 BTBD8Q5XKL5 378 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 PKN3Q6P5Z2 889 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 TSSK4Q6SA08 328 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 IPO4Q8TEX9 1081 aaKnown RBP23.51■■□□□ 1.35
PABPN1-206ENST00000556809 EXOC4Q96A65 974 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 SYNCQ9H7C4 482 aa23.51■■□□□ 1.35
PABPN1-206ENST00000556809 ADH1CP00326 375 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 ERBB2P04626 1255 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 CASP14P31944 242 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 EIF2DP41214 584 aaKnown RBP23.5■■□□□ 1.35
PABPN1-206ENST00000556809 PRKCIP41743 596 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 CXCL12P48061 93 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 GOLGA8FQ08AF8 430 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 GOLGA8DPQ0D2H9 430 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 EFEMP1Q12805 493 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 C12orf40Q86WS4 652 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 MIB1Q86YT6 1006 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 ZBTB44Q8NCP5 570 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 SYN2Q92777 582 aaPredicted RBP23.5■■□□□ 1.35
PABPN1-206ENST00000556809 GOLGA1Q92805 767 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 PCDHB18PQ96TA0 734 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 SPHK2Q9NRA0 654 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 RASAL2Q9UJF2 1139 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 R4GN57 208 aa23.5■■□□□ 1.35
PABPN1-206ENST00000556809 PIEZO1Q92508 2521 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 CHURC1-FNTBB4DL54 471 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 LTFP02788 710 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 KLKB1P03952 638 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 ADH5P11766 374 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 SLC6A11P48066 632 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 COG7P83436 770 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 FBXO43Q4G163 708 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 RSRC2Q7L4I2 434 aaKnown RBP23.49■■□□□ 1.35
PABPN1-206ENST00000556809 ERICH1Q86X53 443 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 TMEM25Q86YD3 366 aa23.49■■□□□ 1.35
PABPN1-206ENST00000556809 MSANTD4Q8NCY6 345 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms