RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 ADAM23O75077 832 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 ATG13O75143 517 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 KLF8O95600 359 aaPredicted RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 APODP05090 189 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 CISD3P0C7P0 127 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 TYRP14679 529 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 HOXA6P31267 233 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 TIE1P35590 1138 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 EIF2DP41214 584 aaKnown RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 GRIA2P42262 883 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 KIR2DL1P43626 348 aaPredicted RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 NRLP54845 237 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 COG7P83436 770 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 GOLGA8FQ08AF8 430 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 GOLGA8DPQ0D2H9 430 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 PPP2R5DQ14738 602 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 KRT31Q15323 416 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 STILQ15468 1287 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 CT47A1Q5JQC4 288 aaPredicted RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 KLHDC7AQ5VTJ3 777 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 FYB2Q5VWT5 728 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 TMEM92Q6UXU6 159 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 ENOSF1Q7L5Y1 443 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 SYT13Q7L8C5 426 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 SLC47A2Q86VL8 602 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 PASD1Q8IV76 773 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 FAM114A1Q8IWE2 563 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 SCUBE3Q8IX30 993 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 ALLCQ8N6M5 410 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 IL17RCQ8NAC3 791 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 PIWIL1Q96J94 861 aaKnown RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 CDK5RAP1Q96SZ6 601 aaKnown RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 LSM14BQ9BX40 385 aaKnown RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 BBS2Q9BXC9 721 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 SLC4A5Q9BY07 1137 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 VPS16Q9H269 839 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 HSD3B7Q9H2F3 369 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 ST7Q9NRC1 585 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 DNAJC17Q9NVM6 304 aaKnown RBP8.48□□□□□ -1.05
VTI1B-206ENST00000556461 FANCLQ9NW38 375 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 DEC1Q9P2X7 70 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 STRIP2Q9ULQ0 834 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 SLC8A2Q9UPR5 921 aa8.48□□□□□ -1.05
VTI1B-206ENST00000556461 KIAA1549LQ6ZVL6 1849 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 GOLGA6L7A0A1B0GV03 622 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 TBC1D3BA6NDS4 549 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 PRRT4C9JH25 899 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 E5RJQ4 531 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 GOLGA6L22H0YM25 854 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 GFRA2O00451 464 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 PES1O00541 588 aaKnown RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 DCLK1O15075 740 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 EPHB6O15197 1021 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 CACNG3O60359 315 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 TSPAN3O60637 253 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 PENKP01210 267 aaPredicted RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 LTFP02788 710 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 EEF1GP26641 437 aaKnown RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 WASP42768 502 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 TNFRSF4P43489 277 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 SGSHP51688 502 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 PITX1P78337 314 aaPredicted RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 MRPS21P82921 87 aaKnown RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 PDCLQ13371 301 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 SIM2Q14190 667 aaPredicted RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 NCAPHQ15003 741 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 TAF5Q15542 800 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 CCDC183Q5T5S1 534 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 EGFLAMQ63HQ2 1017 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 GRAMD4Q6IC98 578 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 MSANTD2Q6P1R3 559 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 PRR23BQ6ZRT6 265 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 TMEM110Q86TL2 294 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 FAM217AQ8IXS0 508 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 FAM71AQ8IYT1 594 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 TERB1Q8NA31 727 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 TXNDC5Q8NBS9 432 aaKnown RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 ADAM32Q8TC27 787 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 RNF139Q8WU17 664 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 IRGQQ8WZA9 623 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 EXOC4Q96A65 974 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 ERLEC1Q96DZ1 483 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 MYEOVQ96EZ4 313 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 CPXM1Q96SM3 734 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 ACOX2Q99424 681 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 NAA15Q9BXJ9 866 aaKnown RBP8.47□□□□□ -1.05
VTI1B-206ENST00000556461 GANQ9H2C0 597 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 PLCB1Q9NQ66 1216 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 ABCC13Q9NSE7 274 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 WDR35Q9P2L0 1181 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 FBXO10Q9UK96 956 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 MMP17Q9ULZ9 603 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 NAALADL1Q9UQQ1 740 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 INVSQ9Y283 1065 aa8.47□□□□□ -1.05
VTI1B-206ENST00000556461 LAMA1P25391 3075 aa8.46□□□□□ -1.05
VTI1B-206ENST00000556461 MYO18AQ92614 2054 aaKnown RBP8.46□□□□□ -1.05
VTI1B-206ENST00000556461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.46□□□□□ -1.06
VTI1B-206ENST00000556461 AXIN1O15169 862 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms