RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 GOLGA7BQ2TAP0 167 aa22.65■■□□□ 1.22
SDR39U1-216ENST00000556175 SGO2Q562F6 1265 aa22.65■■□□□ 1.22
SDR39U1-216ENST00000556175 SLC36A4Q6YBV0 504 aa22.65■■□□□ 1.22
SDR39U1-216ENST00000556175 TMEM9BQ9NQ34 198 aa22.65■■□□□ 1.22
SDR39U1-216ENST00000556175 EPG5Q9HCE0 2579 aa22.64■■□□□ 1.22
SDR39U1-216ENST00000556175 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 GFRA2O00451 464 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 XPO1O14980 1071 aaKnown RBP22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 ZNF217O75362 1048 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 ZBED1O96006 694 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 PENKP01210 267 aaPredicted RBP22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 GABRG2P18507 467 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 HOXD12P35452 270 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 LMAN2Q12907 356 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 E2F5Q15329 346 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 LYSMD4Q5XG99 296 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 SYT12Q8IV01 421 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 TMEFF1Q8IYR6 380 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 SLC35C1Q96A29 364 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 GABRG3Q99928 467 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 OLA1Q9NTK5 396 aaKnown RBP22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 MARCH2Q9P0N8 246 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 CALCOCO1Q9P1Z2 691 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 MBD1Q9UIS9 605 aaPredicted RBP22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 TSPAN16Q9UKR8 245 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 HCN2Q9UL51 889 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 KIAA1257Q9ULG3 409 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 LAMA1P25391 3075 aa22.64■■□□□ 1.21
SDR39U1-216ENST00000556175 A0A1W2PQF6 199 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 C4orf47A7E2U8 309 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 PRRT4C9JH25 899 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 NPC1O15118 1278 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 KCNK5O95279 499 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 CYBBP04839 570 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 CISD3P0C7P0 127 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 CD19P15391 556 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 CORO1AP31146 461 aaKnown RBP22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 WASP42768 502 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 PMS1P54277 932 aaKnown RBP22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 BST2Q10589 180 aaKnown RBP22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 PM20D1Q6GTS8 502 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 TOGARAM2Q6ZUX3 1019 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 ELOA2Q8IYF1 753 aaPredicted RBP22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 BHMTQ93088 406 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 PLD4Q96BZ4 506 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 DHTKD1Q96HY7 919 aaPredicted RBP22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 NUSAP1Q9BXS6 441 aaKnown RBP22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 LRRC4Q9HBW1 653 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 FBXO10Q9UK96 956 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 SLC27A6Q9Y2P4 619 aa22.63■■□□□ 1.21
SDR39U1-216ENST00000556175 TRIM49BA6NDI0 452 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 KLKB1P03952 638 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 HMBSP08397 361 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 PTGER3P43115 390 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 RPL6Q02878 288 aaKnown RBP22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 CETN1Q12798 172 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 TRIM61Q5EBN2 209 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 N4BP2L1Q5TBK1 243 aaPredicted RBP22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 ARMCX6Q7L4S7 300 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 FRMD1Q8N878 549 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 IPO4Q8TEX9 1081 aaKnown RBP22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 CEP63Q96MT8 703 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 IPO9Q96P70 1041 aaKnown RBP22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 ACOX2Q99424 681 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 PLK2Q9NYY3 685 aa22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 AGO1Q9UL18 857 aaKnown RBP22.62■■□□□ 1.21
SDR39U1-216ENST00000556175 CHD8Q9HCK8 2581 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 SLC12A8A0AV02 714 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 PATE3B3GLJ2 98 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 SETSIPP0DME0 302 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 VDRP11473 427 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 PDE4CQ08493 712 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 STARD3Q14849 445 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 FYB2Q5VWT5 728 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 RABEPKQ7Z6M1 372 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 SIX6OS1Q8N1H7 587 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 CPXM2Q8N436 756 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 UCMAQ8WVF2 138 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 ERCC4Q92889 916 aaPredicted RBP22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 ULBP1Q9BZM6 244 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 ANGPTL2Q9UKU9 493 aa22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 TNRC6BQ9UPQ9 1833 aaKnown RBP22.61■■□□□ 1.21
SDR39U1-216ENST00000556175 PMM2O15305 246 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 NDUFV2P19404 249 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 FMO5P49326 533 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 ZNF132P52740 706 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 MFAP3P55082 362 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 LRMPQ12912 555 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 CCDC40Q4G0X9 1142 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 PEAR1Q5VY43 1037 aaPredicted RBP22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 DENND1CQ8IV53 801 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 CEP76Q8TAP6 659 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 RNF139Q8WU17 664 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 NT5C1BQ96P26 610 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 CD248Q9HCU0 757 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 CACNA2D2Q9NY47 1150 aa22.6■■□□□ 1.21
SDR39U1-216ENST00000556175 PAEPP09466 180 aa22.59■■□□□ 1.21
SDR39U1-216ENST00000556175 PMLP29590 882 aa22.59■■□□□ 1.21
SDR39U1-216ENST00000556175 HARS2P49590 506 aaKnown RBP22.59■■□□□ 1.21
SDR39U1-216ENST00000556175 NOVA1P51513 510 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms