RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 VWCEQ96DN2 955 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 LBHD1Q9BQE6 289 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 TRIM62Q9BVG3 475 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 COLEC11Q9BWP8 271 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 RHOBTB2Q9BYZ6 727 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 FAM204AQ9H8W3 233 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 GOLGA6AQ9NYA3 693 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 NAALADL1Q9UQQ1 740 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 TTC3P53804 2025 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 RIPK2O43353 540 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 ALDH2P05091 517 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 MYZAPP0CAP1 466 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 ETS1P14921 441 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 CYP2F1P24903 491 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 CHKAP35790 457 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 CDR1P51861 262 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 RABGGTBP53611 331 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 PITX1P78337 314 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 ROR1Q01973 937 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 FPGSQ05932 587 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 MORF4L2Q15014 288 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 PPP6R3Q5H9R7 873 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 NPNTQ6UXI9 565 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 FAM131BQ86XD5 332 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 NPAS4Q8IUM7 802 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 TMEM199Q8N511 208 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 ZCCHC9Q8N567 271 aaKnown RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 OR2W6PQ8NHA6 318 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 KCTD15Q96SI1 283 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 MRPL9Q9BYD2 267 aaKnown RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 PSD3Q9NYI0 1048 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 ADAM28Q9UKQ2 775 aa15.29■□□□□ 0.04
VPS33B-205ENST00000556096 PRG3Q9Y2Y8 225 aaPredicted RBP15.29■□□□□ 0.04
VPS33B-205ENST00000556096 COL4A4P53420 1690 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 CFAP69A5D8W1 941 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 HMGB1P1B2RPK0 211 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 F9P00740 461 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 IFNB1P01574 187 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 NR2C2P49116 596 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 GYS2P54840 703 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 MRPL58Q14197 206 aaKnown RBP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 SLC29A2Q14542 456 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 NFE2Q16621 373 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 RNASEH2BQ5TBB1 312 aaKnown RBP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 DARS2Q6PI48 645 aaKnown RBP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 C1orf228Q6PIY5 440 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 CROCCP2Q86T23 111 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 UNC45BQ8IWX7 931 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 FAM76AQ8TAV0 307 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 NTAN1Q96AB6 310 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 FUBP3Q96I24 572 aaKnown RBP eCLIP15.28■□□□□ 0.04
VPS33B-205ENST00000556096 ATP6V1G3Q96LB4 118 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 CSPG4P5Q96PW8 444 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 TMEM175Q9BSA9 504 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 TMEM109Q9BVC6 243 aa15.28■□□□□ 0.04
VPS33B-205ENST00000556096 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.04
VPS33B-205ENST00000556096 NLRC5Q86WI3 1866 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 PTPRDP23468 1912 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.04
VPS33B-205ENST00000556096 SMAPO00193 183 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 NCAM1P13591 858 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 RFC2P35250 354 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 RPL22P35268 128 aaKnown RBP15.27■□□□□ 0.04
VPS33B-205ENST00000556096 ARL4AP40617 200 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 GDF10P55107 478 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 IFFO1Q0D2I5 559 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 SCAPQ12770 1279 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 XRCC4Q13426 336 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 C16orf59Q7L2K0 433 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 CCDC25Q86WR0 208 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 SLC7A14Q8TBB6 771 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 RTP4Q96DX8 246 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 CDC42EP4Q9H3Q1 356 aaKnown RBP15.27■□□□□ 0.04
VPS33B-205ENST00000556096 WDR6Q9NNW5 1121 aaKnown RBP15.27■□□□□ 0.04
VPS33B-205ENST00000556096 PIGVQ9NUD9 493 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 CWC15Q9P013 229 aaKnown RBP15.27■□□□□ 0.04
VPS33B-205ENST00000556096 SHOC2Q9UQ13 582 aa15.27■□□□□ 0.04
VPS33B-205ENST00000556096 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.26■□□□□ 0.03
VPS33B-205ENST00000556096 OR6C75A6NL08 312 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 H7C0C1 242 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 TNFRSF10BO14763 440 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 ADRA1BP35368 520 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 ATP5OP48047 213 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 ELAVL2Q12926 359 aaKnown RBP15.26■□□□□ 0.03
VPS33B-205ENST00000556096 SLC39A12Q504Y0 691 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 VARS2Q5ST30 1063 aaKnown RBP15.26■□□□□ 0.03
VPS33B-205ENST00000556096 AGBL2Q5U5Z8 902 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 EMC10Q5UCC4 262 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 BSPRYQ5W0U4 402 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 CNKSR3Q6P9H4 555 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 C10orf88Q9H8K7 445 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 USP29Q9HBJ7 922 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 FBXW11Q9UKB1 542 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 FARP1Q9Y4F1 1045 aaPredicted RBP15.26■□□□□ 0.03
VPS33B-205ENST00000556096 PTPRSQ13332 1948 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 H3BRJ5 948 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 TTC4O95801 387 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 FGFR3P22607 806 aa15.26■□□□□ 0.03
VPS33B-205ENST00000556096 GRIK1P39086 918 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms