RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 METTL25Q8N6Q8 603 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-216ENST00000555550 WDYHV1Q96HA8 205 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 FAM234AQ9H0X4 552 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 HEYLQ9NQ87 328 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-216ENST00000555550 MDFICQ9P1T7 246 aa4.53□□□□□ -1.68
SCFD1-216ENST00000555550 A8MVJ9 347 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 F8W8V4 182 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 FOXN3O00409 490 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-216ENST00000555550 ADRA1DP25100 572 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 RBL1P28749 1068 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 EIF4A1P60842 406 aaKnown RBP4.52□□□□□ -1.69
SCFD1-216ENST00000555550 TXNL4AP83876 142 aaKnown RBP4.52□□□□□ -1.69
SCFD1-216ENST00000555550 GALEQ14376 348 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 MFSD13AQ14CX5 517 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 USP49Q70CQ1 688 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 FAM71DQ8N9W8 422 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 PNISRQ8TF01 805 aaKnown RBP4.52□□□□□ -1.69
SCFD1-216ENST00000555550 PHKBQ93100 1093 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 IQCDQ96DY2 449 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 UNKQ9C0B0 810 aaKnown RBP4.52□□□□□ -1.69
SCFD1-216ENST00000555550 ASAP1Q9ULH1 1129 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 MAFFQ9ULX9 164 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 FAM50BQ9Y247 325 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 SLC27A6Q9Y2P4 619 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 HS3ST3B1Q9Y662 390 aa4.52□□□□□ -1.69
SCFD1-216ENST00000555550 CLIC1O00299 241 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 IL18RAPO95256 599 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 TOMM40O96008 361 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 TMEM225BP0DP42 221 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 MCM5P33992 734 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 ID2Q02363 134 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 CFHR3Q02985 330 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 DEUP1Q05D60 604 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 DAG1Q14118 895 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 SEC23BQ15437 767 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 ZNF585BQ52M93 769 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 MANEALQ5VSG8 457 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 RANBP10Q6VN20 620 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 DGKHQ86XP1 1220 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 LIX1LQ8IVB5 337 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 PELI3Q8N2H9 469 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 CCDC33Q8N5R6 958 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 C12orf76Q8N812 135 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-216ENST00000555550 PNPLA1Q8N8W4 532 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 LRRC46Q96FV0 321 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 CINPQ9BW66 212 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-216ENST00000555550 SLC25A32Q9H2D1 315 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 MLXIPQ9HAP2 919 aa4.51□□□□□ -1.69
SCFD1-216ENST00000555550 ERVV-2B6SEH9 535 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 FYB1O15117 783 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 KPNA5O15131 536 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 CA12O43570 354 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 T-ENOLP0DO92 83 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 CLCA4Q14CN2 919 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 ZNF628Q5EBL2 1059 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 TMTC4Q5T4D3 741 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 ANKRD13BQ86YJ7 626 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 CCAR1Q8IX12 1150 aaKnown RBP4.5□□□□□ -1.69
SCFD1-216ENST00000555550 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 CCDC150Q8NCX0 1101 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 SLCO5A1Q9H2Y9 848 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 RGS17Q9UGC6 210 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-216ENST00000555550 ICKQ9UPZ9 632 aa4.5□□□□□ -1.69
SCFD1-216ENST00000555550 TRIP12Q14669 1992 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-216ENST00000555550 POM121BA6NF01 834 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 CCNT2O60583 730 aaKnown RBP4.49□□□□□ -1.69
SCFD1-216ENST00000555550 WDR47O94967 919 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 CTSAP10619 480 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 ATICP31939 592 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 SRSF1Q07955 248 aaKnown RBP eCLIP4.49□□□□□ -1.69
SCFD1-216ENST00000555550 CCDC15Q0P6D6 951 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 PFKFB3Q16875 520 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-216ENST00000555550 ANO7Q6IWH7 933 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 ARFGAP1Q8N6T3 406 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 MBD3L2Q8NHZ7 208 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-216ENST00000555550 EDC3Q96F86 508 aaKnown RBP4.49□□□□□ -1.69
SCFD1-216ENST00000555550 ZDHHC12Q96GR4 267 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 HIC2Q96JB3 615 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 FAM227BQ96M60 508 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 ZPBPQ9BS86 351 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 ARL8BQ9NVJ2 186 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 VPS51Q9UID3 782 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 CAPN11Q9UMQ6 739 aa4.49□□□□□ -1.69
SCFD1-216ENST00000555550 C4orf47A7E2U8 309 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 COQ9O75208 318 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 TULP3O75386 442 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 TACR3P29371 465 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 PIK3CBP42338 1070 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 COPAP53621 1224 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 GPC5P78333 572 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 GPS1Q13098 491 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 SLC14A1Q13336 389 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 COBLL1Q53SF7 1204 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 KLHDC7AQ5VTJ3 777 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 DAB2IPQ5VWQ8 1189 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 CYB5RLQ6IPT4 315 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 LVRNQ6Q4G3 990 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 CRTC1Q6UUV9 634 aa4.48□□□□□ -1.69
SCFD1-216ENST00000555550 DEF8Q6ZN54 512 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms