RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 GEN1Q17RS7 908 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 KNOP1Q1ED39 458 aaKnown RBP13.81□□□□□ -0.2
XRCC3-212ENST00000555231 SOWAHCQ53LP3 525 aaPredicted RBP13.81□□□□□ -0.2
XRCC3-212ENST00000555231 C10orf120Q5SQS8 335 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 DCAF12L1Q5VU92 463 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 Q6ZNB5 142 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 PDZD3Q86UT5 571 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 DNASE2BQ8WZ79 361 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
XRCC3-212ENST00000555231 GAREM1Q9H706 876 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 ITM2CQ9NQX7 267 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.81□□□□□ -0.2
XRCC3-212ENST00000555231 CGNQ9P2M7 1197 aaKnown RBP13.81□□□□□ -0.2
XRCC3-212ENST00000555231 FBXO10Q9UK96 956 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 PCOLCE2Q9UKZ9 415 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 SCML2Q9UQR0 700 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 APOBEC2Q9Y235 224 aaKnown RBP13.81□□□□□ -0.2
XRCC3-212ENST00000555231 CKAP5Q14008 2032 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 NUMA1Q14980 2115 aa13.81□□□□□ -0.2
XRCC3-212ENST00000555231 POLR2DO15514 142 aaKnown RBP13.8□□□□□ -0.2
XRCC3-212ENST00000555231 STX6O43752 255 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 CBFA2T3O75081 653 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 PPP6R2O75170 966 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 STC2O76061 302 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 KLKB1P03952 638 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 P4HA1P13674 534 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 MFAP3P55082 362 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 CLDN10P78369 228 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 BNC1Q01954 994 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 SGSM1Q2NKQ1 1148 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 SCD5Q86SK9 330 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 METTL3Q86U44 580 aaKnown RBP13.8□□□□□ -0.2
XRCC3-212ENST00000555231 UNC93AQ86WB7 457 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 MARCH9Q86YJ5 346 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 TMPRSS6Q8IU80 811 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 GRAMD1CQ8IYS0 662 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 HNRNPLLQ8WVV9 542 aaKnown RBP13.8□□□□□ -0.2
XRCC3-212ENST00000555231 CYFIP2Q96F07 1278 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 ZDHHC5Q9C0B5 715 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 TM7SF3Q9NS93 570 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 USP36Q9P275 1121 aaKnown RBP13.8□□□□□ -0.2
XRCC3-212ENST00000555231 THAP10Q9P2Z0 257 aaPredicted RBP13.8□□□□□ -0.2
XRCC3-212ENST00000555231 EIF2B4Q9UI10 523 aaKnown RBP13.8□□□□□ -0.2
XRCC3-212ENST00000555231 RASAL2Q9UJF2 1139 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 DNMT3LQ9UJW3 386 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 NAGPAQ9UK23 515 aa13.8□□□□□ -0.2
XRCC3-212ENST00000555231 NBEAQ8NFP9 2946 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 GOLGA8CPA6NN73 597 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 CUTAO60888 179 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 KIF20AO95235 890 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 MATKP42679 507 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 ASPAP45381 313 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 TPMTP51580 245 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 ZACNQ401N2 412 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 FOXD4L5Q5VV16 416 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-212ENST00000555231 FYB2Q5VWT5 728 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 SV2AQ7L0J3 742 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 FAM124AQ86V42 546 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 FOXD4L4Q8WXT5 416 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-212ENST00000555231 SIPA1Q96FS4 1042 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 HNRNPABQ99729 332 aaKnown RBP13.79□□□□□ -0.2
XRCC3-212ENST00000555231 CLEC4EQ9ULY5 219 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 FNDC3AQ9Y2H6 1198 aaKnown RBP13.79□□□□□ -0.2
XRCC3-212ENST00000555231 SLC27A6Q9Y2P4 619 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 RAXQ9Y2V3 346 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 ACACAQ13085 2346 aa13.79□□□□□ -0.2
XRCC3-212ENST00000555231 LAMA5O15230 3695 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 METTL12A8MUP2 240 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 BCAT2O15382 392 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 SYNCRIPO60506 623 aaKnown RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 CILPO75339 1184 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 ASS1P00966 412 aaKnown RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 PENKP01210 267 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 HLA-DRAP01903 254 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 ATXN1LP0C7T5 689 aaKnown RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 PRKCHP24723 683 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 PIK3CAP42336 1068 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 KIF11P52732 1056 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 COPAP53621 1224 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 EFEMP1Q12805 493 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 ZNF234Q14588 700 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 HLA-BQ31612 363 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 FOXD4L6Q3SYB3 417 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 KLHDC10Q6PID8 442 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 FOXD4L3Q6VB84 417 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 GLRX5Q86SX6 157 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 CADM4Q8NFZ8 388 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 RHBDD1Q8TEB9 315 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 UCMAQ8WVF2 138 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 ZNF396Q96N95 335 aaPredicted RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 DMAC2Q9NW81 257 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 SLCO1B1Q9Y6L6 691 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 ITPR1Q14643 2758 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 GOLGA4Q13439 2230 aaKnown RBP13.78□□□□□ -0.2
XRCC3-212ENST00000555231 APC2O95996 2303 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 KNL1Q8NG31 2342 aa13.78□□□□□ -0.2
XRCC3-212ENST00000555231 FREM2Q5SZK8 3169 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms