RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 RASAL2Q9UJF2 1139 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 SORCS3Q9UPU3 1222 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 CPQQ9Y646 472 aa11.4□□□□□ -0.58
SHMT2-218ENST00000555213 GREB1Q4ZG55 1949 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 GRID2IPA4D2P6 1211 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 HEPACAM2A8MVW5 462 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 KIF5CO60282 957 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 MTA2O94776 668 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 ASGR2P07307 311 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 NCAM1P13591 858 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 PSMC3P17980 439 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 ABCB4P21439 1286 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 FCARP24071 287 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 VIPR2P41587 438 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 GABRB2P47870 512 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 KPNA1P52294 538 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-218ENST00000555213 HADHBP55084 474 aaKnown RBP11.39□□□□□ -0.59
SHMT2-218ENST00000555213 AMPD2Q01433 879 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 SLC6A3Q01959 620 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 C1QBPQ07021 282 aaKnown RBP11.39□□□□□ -0.59
SHMT2-218ENST00000555213 EFEMP1Q12805 493 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 USP4Q13107 963 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 TDGQ13569 410 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 FAM102AQ5T9C2 384 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-218ENST00000555213 OLFML1Q6UWY5 402 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 BEND5Q7L4P6 421 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 SLC26A9Q7LBE3 791 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 MIB1Q86YT6 1006 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 RNF135Q8IUD6 432 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 KIAA1958Q8N8K9 716 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 TPCN2Q8NHX9 752 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 BPIFB1Q8TDL5 484 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 SH3RF2Q8TEC5 729 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 CLEC4CQ8WTT0 213 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 EDEM1Q92611 657 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 FGF14Q92915 247 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 SLC22A12Q96S37 553 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 CYP2S1Q96SQ9 504 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 NOTCH4Q99466 2003 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 TRMT61BQ9BVS5 477 aaKnown RBP11.39□□□□□ -0.59
SHMT2-218ENST00000555213 OSER1Q9NX31 292 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 MARCH2Q9P0N8 246 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 RAPGEFL1Q9UHV5 662 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 LSM7Q9UK45 103 aaKnown RBP11.39□□□□□ -0.59
SHMT2-218ENST00000555213 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
SHMT2-218ENST00000555213 GOLGA8SH3BPF8 625 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 SLC9A3R1O14745 358 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-218ENST00000555213 DAB1O75553 588 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 MYBL1P10243 752 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 TCF3P15923 654 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 DESP17661 470 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 COG7P83436 770 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 PFKPQ01813 784 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 PAPD7Q5XG87 772 aaKnown RBP11.38□□□□□ -0.59
SHMT2-218ENST00000555213 TANGO2Q6ICL3 276 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 DNAJC24Q6P3W2 148 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 BHLHA9Q7RTU4 235 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 PHLDB2Q86SQ0 1253 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 XYLT1Q86Y38 959 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 MFSD6LQ8IWD5 586 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 UBALD2Q8IYN6 164 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 NDRG1Q92597 394 aaKnown RBP11.38□□□□□ -0.59
SHMT2-218ENST00000555213 VCPIP1Q96JH7 1222 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 SERPINB11Q96P15 392 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 RNF38Q9H0F5 515 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 SMOC2Q9H3U7 446 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 BRD9Q9H8M2 597 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 FAM204AQ9H8W3 233 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 LUC7LQ9NQ29 371 aaKnown RBP11.38□□□□□ -0.59
SHMT2-218ENST00000555213 CFAP97Q9P2B7 532 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 TJP2Q9UDY2 1190 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 STAP1Q9ULZ2 295 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 TTC28Q96AY4 2481 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 OBSL1O75147 1896 aa11.38□□□□□ -0.59
SHMT2-218ENST00000555213 NUP210Q8TEM1 1887 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-218ENST00000555213 DOCK8Q8NF50 2099 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 LEFTY2O00292 366 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 ATMINO43313 823 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-218ENST00000555213 PALMO75781 387 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 TBX18O95935 607 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 ATP1A1P05023 1023 aaKnown RBP11.37□□□□□ -0.59
SHMT2-218ENST00000555213 IRF1P10914 325 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 SRFP11831 508 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 RRM1P23921 792 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 CASQ1P31415 396 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 IFNAR2P48551 515 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 PGFP49763 221 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 GSCP56915 257 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-218ENST00000555213 FCHO2Q0JRZ9 810 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 GRM2Q14416 872 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 PDGFRLQ15198 375 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 ZNF77Q15935 545 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 DCAF6Q58WW2 860 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 PLEKHA7Q6IQ23 1121 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 MSANTD2Q6P1R3 559 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 VITQ6UXI7 678 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 HFE2Q6ZVN8 426 aa11.37□□□□□ -0.59
SHMT2-218ENST00000555213 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms