RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 BBOF1Q8ND07 529 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ARMC5Q96C12 935 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ZNF689Q96CS4 500 aaPredicted RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 CALN1Q9BXU9 219 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 GPR62Q9BZJ7 368 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 FOXP3Q9BZS1 431 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 PRDM16Q9HAZ2 1276 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ETNK2Q9NVF9 386 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ASIC3Q9UHC3 531 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 FBXW11Q9UKB1 542 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ADAM28Q9UKQ2 775 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ZMYND8Q9ULU4 1186 aaPredicted RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 MYLKQ15746 1914 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 CHD5Q8TDI0 1954 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ARHGEF37A1IGU5 675 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 APOL1O14791 398 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 OPA1O60313 960 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 TCEA3O75764 348 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 CDR1P51861 262 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 NRLP54845 237 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 SLC8A3P57103 927 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 EIF3EP60228 445 aaKnown RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 GPS2Q13227 327 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 XRCC4Q13426 336 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 KCNJ11Q14654 390 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 PAFAH1B3Q15102 231 aaKnown RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 DCAF6Q58WW2 860 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 VARS2Q5ST30 1063 aaKnown RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 AGBL2Q5U5Z8 902 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 HOOK3Q86VS8 718 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 SIX6OS1Q8N1H7 587 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 THEM5Q8N1Q8 247 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 FUBP3Q96I24 572 aaKnown RBP eCLIP9.25□□□□□ -0.93
TDP1-210ENST00000554976 ATP6V1G3Q96LB4 118 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 C8orf48Q96LL4 319 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 QKIQ96PU8 341 aaKnown RBP eCLIP9.25□□□□□ -0.937e-10■■■■■ 43.3
TDP1-210ENST00000554976 RNF208Q9H0X6 261 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 HIPK3Q9H422 1215 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 FAM204AQ9H8W3 233 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 LRRC4Q9HBW1 653 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 ARHGEF38Q9NXL2 777 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 NINJ2Q9NZG7 142 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 VPS18Q9P253 973 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 TPX2Q9ULW0 747 aaKnown RBP9.25□□□□□ -0.93
TDP1-210ENST00000554976 PCDHB7Q9Y5E2 793 aa9.25□□□□□ -0.93
TDP1-210ENST00000554976 FAM72CH0Y354 149 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 POLR3GO15318 223 aaPredicted RBP9.24□□□□□ -0.93
TDP1-210ENST00000554976 PQBP1O60828 265 aaKnown RBP9.24□□□□□ -0.93
TDP1-210ENST00000554976 OR4Q2P0C623 313 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 GOT1P17174 413 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 ADCY8P40145 1251 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 MAGEA11P43364 429 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 HCAR3P49019 387 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 GAD2Q05329 585 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 TFDP2Q14188 446 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 SLC29A2Q14542 456 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 PRKD1Q15139 912 aaPredicted RBP9.24□□□□□ -0.93
TDP1-210ENST00000554976 FAM72AQ5TYM5 149 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 ANKRD22Q5VYY1 191 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 FAM72DQ6L9T8 149 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 FAM72BQ86X60 149 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 EXOC4Q96A65 974 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 ARHGEF4Q9NR80 690 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 OSER1Q9NX31 292 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 RRN3Q9NYV6 651 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.24□□□□□ -0.93
TDP1-210ENST00000554976 MTRF1LQ9UGC7 380 aaKnown RBP9.24□□□□□ -0.93
TDP1-210ENST00000554976 ANAPC5Q9UJX4 755 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 SHOC2Q9UQ13 582 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 ZNF148Q9UQR1 794 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 TCRBV7S3A2A0A539 114 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 GALTP07902 379 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 ITGB8P26012 769 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 GCAP28676 217 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 OR1G1P47890 313 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 SLC5A3P53794 718 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 EIF3BP55884 814 aaKnown RBP9.24□□□□□ -0.93
TDP1-210ENST00000554976 KRT81Q14533 505 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 SCYL2Q6P3W7 929 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
TDP1-210ENST00000554976 FAM131BQ86XD5 332 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 MAP7D3Q8IWC1 876 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 AGGF1Q8N302 714 aaeCLIP9.24□□□□□ -0.93
TDP1-210ENST00000554976 DNAJC5GQ8N7S2 189 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 SCAMP5Q8TAC9 235 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 UBLCP1Q8WVY7 318 aaPredicted RBP9.24□□□□□ -0.93
TDP1-210ENST00000554976 KLC2Q9H0B6 622 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 DTLQ9NZJ0 730 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 ATG2AQ2TAZ0 1938 aa9.24□□□□□ -0.93
TDP1-210ENST00000554976 M0QYT0 321 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 TMEM63AO94886 807 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 ABHD2P08910 425 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 RBP3P10745 1247 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 VAV1P15498 845 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 HOXC13P31276 330 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 NR2C2P49116 596 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 GBE1Q04446 702 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 GPS1Q13098 491 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 CALCOCO2Q13137 446 aa9.23□□□□□ -0.93
TDP1-210ENST00000554976 MANEALQ5VSG8 457 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms