RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	GNAL	P38405	381 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	KCNJ5	P48544	419 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	PTH2R	P49190	550 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	CLK3	P49761	638 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	MMP14	P50281	582 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	RBM5	P52756	815 aa	Known RBP eCLIP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	CACNB3	P54284	484 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	FKBP1A	P62942	108 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	MRPS35	P82673	323 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	TAP2	Q03519	686 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	SREBF2	Q12772	1141 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	FGL2	Q14314	439 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	HLX	Q14774	488 aa	Predicted RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	PKN2	Q16513	984 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	CCDC57	Q2TAC2	916 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	GFOD2	Q3B7J2	385 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	ZNF804A	Q7Z570	1209 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	WDR75	Q8IWA0	830 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	VGLL2	Q8N8G2	317 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	TTC8	Q8TAM2	541 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	MRGPRX1	Q96LB2	322 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	P2RX7	Q99572	595 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	TMEM39B	Q9GZU3	492 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	PRDM13	Q9H4Q3	707 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	BICC1	Q9H694	974 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	ZMAT3	Q9HA38	289 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	ALG13	Q9NP73	1137 aa	Known RBP	6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	CNNM1	Q9NRU3	951 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	TRIM17	Q9Y577	477 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956	UTY	O14607	1347 aa		6.16	□□□□□ -1.42
PSMC6-208	ENST00000554956		A0A0B4J269	797 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	MANSC4	A6NHS7	340 aa	Predicted RBP	6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	TCP10L2	B9ZVM9	353 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956		F5H697	171 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	TUSC2	O75896	110 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	MAP4K4	O95819	1239 aa	Predicted RBP	6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	NUDT3	O95989	172 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	RHO	P08100	348 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	CHRM2	P08172	466 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	SIM1	P81133	766 aa	Predicted RBP	6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	TUBB3	Q13509	450 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	UBE4A	Q14139	1066 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	MLC1	Q15049	377 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	SMN1	Q16637	294 aa	Known RBP	6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	RABL6	Q3YEC7	729 aa	Predicted RBP	6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	FAM160B1	Q5W0V3	765 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	SWSAP1	Q6NVH7	229 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	FAM9B	Q8IZU0	186 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	CD99L2	Q8TCZ2	262 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	BRI3BP	Q8WY22	251 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	TFAP2B	Q92481	460 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	ZG16B	Q96DA0	208 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	FBXL20	Q96IG2	436 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	TTYH3	Q9C0H2	523 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	SIK2	Q9H0K1	926 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	C9orf78	Q9NZ63	289 aa	Predicted RBP	6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	FOXJ2	Q9P0K8	574 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	LRIT1	Q9P2V4	623 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	HESX1	Q9UBX0	185 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	DDX20	Q9UHI6	824 aa	Known RBP	6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	ZNHIT2	Q9UHR6	403 aa		6.15	□□□□□ -1.42
PSMC6-208	ENST00000554956	PSME4	Q14997	1843 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956		A6NNZ2	444 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	DCLK1	O15075	740 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	PROM1	O43490	865 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	EN2	P19622	333 aa	Predicted RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	FOLR3	P41439	243 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	RFX5	P48382	616 aa	Predicted RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	GCLC	P48506	637 aa	Predicted RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZNF134	P52741	427 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	CHAF1A	Q13111	956 aa	Predicted RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	VGLL4	Q14135	290 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	ZNF169	Q14929	603 aa	Predicted RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	SUPT20HL1	Q3ZLR7	823 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	RBM20	Q5T481	1227 aa	Known RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	VPS53	Q5VIR6	699 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	APOBEC3H	Q6NTF7	200 aa	Known RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	NPNT	Q6UXI9	565 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	B3GALNT2	Q8NCR0	500 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	OPTN	Q96CV9	577 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	SLC46A1	Q96NT5	459 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	ARHGAP39	Q9C0H5	1083 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	USP44	Q9H0E7	712 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	ATP6V0A4	Q9HBG4	840 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	RAD54B	Q9Y620	910 aa		6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	TNRC18	O15417	2968 aa	Predicted RBP	6.14	□□□□□ -1.43
PSMC6-208	ENST00000554956	VWC2L	B2RUY7	222 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	ERC2	O15083	957 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	ANP32C	O43423	234 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	GRP	P07492	148 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	KIT	P10721	976 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	ITGAL	P20701	1170 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	FGFR2	P21802	821 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	CTGF	P29279	349 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	AGFG1	P52594	562 aa	Known RBP	6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	PURA	Q00577	322 aa	Known RBP	6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	LLGL1	Q15334	1064 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	MINDY4	Q4G0A6	757 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	ANO6	Q4KMQ2	910 aa		6.13	□□□□□ -1.43
PSMC6-208	ENST00000554956	ARHGAP29	Q52LW3	1261 aa		6.13	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms