RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PGBD2Q6P3X8 592 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ZNF788Q6ZQV5 615 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 KRT28Q7Z3Y7 464 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 AMIGO2Q86SJ2 522 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 BPIFB1Q8TDL5 484 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 DDB2Q92466 427 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 RFKQ969G6 155 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 TTLL2Q9BWV7 592 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 AMBRA1Q9C0C7 1298 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 CPNE5Q9HCH3 593 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 PTPRHQ9HD43 1115 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 HEYLQ9NQ87 328 aaPredicted RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 RRP7BPQ9NSQ0 103 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 DNMT3BQ9UBC3 853 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 DKK3Q9UBP4 350 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 NDRG4Q9ULP0 352 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 CAPN11Q9UMQ6 739 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 MAGED2Q9UNF1 606 aaPredicted RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 MRPS17Q9Y2R5 130 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ENTPD2Q9Y5L3 495 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 MBD5Q9P267 1494 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 SETD5Q9C0A6 1442 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 LAMA3Q16787 3333 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 SPHKAPQ2M3C7 1700 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ABCA3Q99758 1704 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.8□□□□□ -2.12
PRPF39-208ENST00000554785 ADGRA2Q96PE1 1338 aa1.8□□□□□ -2.12
PRPF39-208ENST00000554785 A0A087WV62 115 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 LOC102724159A0A0B4J2E5 919 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 DNAJC9-AS1A6NH13 148 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 MANSC4A6NHS7 340 aaPredicted RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 AQP7P3A6NL99 342 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 FFAR2O15552 330 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 RGS10O43665 173 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 RRP9O43818 475 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TCEA3O75764 348 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PIAS2O75928 621 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TSPY4P0CV99 314 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TSPY10P0CW01 314 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 IDEP14735 1019 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 GABRB3P28472 473 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 GRIA3P42263 894 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TRAPPC10P48553 1259 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 COPAP53621 1224 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ITGA8P53708 1063 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PRKAG1P54619 331 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SP2Q02086 613 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TFF2Q03403 129 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TRIM14Q14142 442 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PWP2Q15269 919 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ZNF750Q32MQ0 723 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CACHD1Q5VU97 1274 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 FBXO38Q6PIJ6 1188 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 KCTD20Q7Z5Y7 419 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SLC15A3Q8IY34 581 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SRRM1Q8IYB3 904 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SPARTQ8N0X7 666 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 FAM109AQ8N4B1 249 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ZNF527Q8NB42 609 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CYP2W1Q8TAV3 490 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 MUL1Q969V5 352 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 FAM136AQ96C01 138 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SNX27Q96L92 541 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 UROC1Q96N76 676 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TIMP4Q99727 224 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 GDF15Q99988 308 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 STK33Q9BYT3 514 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TPSD1Q9BZJ3 242 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 FAM83DQ9H4H8 585 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CXorf36Q9H7Y0 433 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PPCSQ9HAB8 311 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 AS3MTQ9HBK9 375 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 GBA2Q9HCG7 927 aaPredicted RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 TM7SF3Q9NS93 570 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 RGL1Q9NZL6 768 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SLC17A6Q9P2U8 582 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 DKK4Q9UBT3 224 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SERTAD3Q9UJW9 196 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SLC39A10Q9ULF5 831 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SSX2IPQ9Y2D8 614 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CDY1Q9Y6F8 540 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 A0A0C4DFX4 3053 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 EIF2AK4Q9P2K8 1649 aaKnown RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 RTEL1-TNFRSF6BF6WH68 1400 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PTPRUQ92729 1446 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 ADGRL3Q9HAR2 1447 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 UNC13BO14795 1591 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 CROCC2H7BZ55 1655 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 EYSQ5T1H1 3165 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 FYCO1Q9BQS8 1478 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 UNC80Q8N2C7 3258 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 A0A087WZ62 844 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 FAM234BA2RU67 622 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 GOLGA6L3A6NEY3 463 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 PODXLO00592 558 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 KCNQ3O43525 872 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 SRGAP2O75044 1071 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 NDST3O95803 873 aa1.79□□□□□ -2.12
PRPF39-208ENST00000554785 NHLRC4P0CG21 123 aaPredicted RBP1.79□□□□□ -2.12
PRPF39-208ENST00000554785 HOXB6P17509 224 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms