RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 APBB1IPQ7Z5R6 666 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 PROSER1Q86XN7 944 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 FBXL16Q8N461 479 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 DEFB124Q8NES8 71 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 BPIFB1Q8TDL5 484 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 HAS1Q92839 578 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 EXOC4Q96A65 974 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 ZFYVE19Q96K21 471 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 CCDC43Q96MW1 224 aaKnown RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 PLCD4Q9BRC7 762 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 POLR3FQ9H1D9 316 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-229ENST00000554672 PDZD7Q9H5P4 517 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 SLC38A7Q9NVC3 462 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 GGT7Q9UJ14 662 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 GDAQ9Y2T3 454 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 ASB3Q9Y575 518 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 NUB1Q9Y5A7 615 aa5.26□□□□□ -1.57
ATXN3-229ENST00000554672 NCANO14594 1321 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 CCDC194A0A1B0GVG4 234 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 PODXLO00592 558 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 SIGLEC6O43699 453 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 CCNT1O60563 726 aaKnown RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 OAZ2O95190 189 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 DEXIO95424 95 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 APBB3O95704 486 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 CAPNS1P04632 268 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 PRKCBP05771 671 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 INHBBP09529 407 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 NME1P15531 152 aaKnown RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 KIR2DL1P43626 348 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 KIR2DL2P43627 348 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 RARRES1P49788 294 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 PCBP3P57721 371 aaKnown RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 IRX4P78413 519 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 SIM1P81133 766 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 SSRP1Q08945 709 aaKnown RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 LMAN2Q12907 356 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 RUNX3Q13761 415 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 GLRA4Q5JXX5 417 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 CDCA2Q69YH5 1023 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 FSTL4Q6MZW2 842 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 KIAA1211LQ6NV74 962 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 PKN3Q6P5Z2 889 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 ALKAL1Q6UXT8 129 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 MAEAQ7L5Y9 396 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 SYT13Q7L8C5 426 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 DNAJB7Q7Z6W7 309 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 NEK8Q86SG6 692 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 TMC8Q8IU68 726 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 MCPH1Q8NEM0 835 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 BEST2Q8NFU1 509 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 CCDC26Q8TAB7 109 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 BRF1Q92994 677 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 C20orf173Q96LM9 149 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 EIF2AK1Q9BQI3 630 aaKnown RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 TASP1Q9H6P5 420 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 GPRC5CQ9NQ84 441 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 TOPORSQ9NS56 1045 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 GKN1Q9NS71 199 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-229ENST00000554672 ZMYM5Q9UJ78 669 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 KLK13Q9UKR3 277 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 PCDHA12Q9UN75 941 aa5.25□□□□□ -1.57
ATXN3-229ENST00000554672 A0A087WWV3 80 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 SPAARA0A1B0GVQ0 90 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 OR14I1A6ND48 311 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 USO1O60763 962 aaKnown RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 EGFP01133 1207 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 KCNE1P15382 129 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 ATP2B1P20020 1258 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 PDIA3P30101 505 aaKnown RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 CCNFP41002 786 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 DPP6P42658 865 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 CTSKP43235 329 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 MCM2P49736 904 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 DGKEP52429 567 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 EFNA5P52803 228 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 EVCP57679 992 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 CCT2P78371 535 aaKnown RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 SCAPQ12770 1279 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 SEMA3BQ13214 749 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 GPR17Q13304 367 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 HNRNPDQ14103 355 aaKnown RBP5.24□□□□□ -1.57
ATXN3-229ENST00000554672 DMC1Q14565 340 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 SSPNQ14714 243 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 NPY5RQ15761 445 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 COL28A1Q2UY09 1125 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 ADGRF1Q5T601 910 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 GPR158Q5T848 1215 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 NT5DC1Q5TFE4 455 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 ATF7IP2Q5U623 682 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 EEF1DP3Q658K8 133 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 PMS2CLQ68D20 193 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 CENPPQ6IPU0 288 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 BLOC1S2Q6QNY1 142 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 CEP128Q6ZU80 1094 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 GAREM2Q75VX8 874 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 PIP4P1Q86T03 277 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 ITIH5Q86UX2 942 aa5.24□□□□□ -1.57
ATXN3-229ENST00000554672 SLITRK4Q8IW52 837 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms