RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 UNC5CO95185 931 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 AGR2O95994 175 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 CKBP12277 381 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 EN2P19622 333 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 CASTP20810 708 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 TNFAIP3P21580 790 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 APOBEC3AP31941 199 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 MAN2A2P49641 1150 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 PRIM2P49643 509 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 LBX1P52954 281 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 RNASE9P60153 205 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 PLP2Q04941 152 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 CXCL9Q07325 125 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 TFCP2Q12800 502 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 CRB2Q5IJ48 1285 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 SPECC1Q5M775 1068 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 WDR45BQ5MNZ6 344 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 LDHAL6AQ6ZMR3 332 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 RSRC2Q7L4I2 434 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 ATG9AQ7Z3C6 839 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 ZNF589Q86UQ0 364 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 MYLK4Q86YV6 388 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 NDUFAF2Q8N183 169 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 CHST13Q8NET6 341 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 KBTBD7Q8WVZ9 684 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 EDC3Q96F86 508 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 ZSCAN31Q96LW9 406 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 CCDC138Q96M89 665 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 JAKMIP1Q96N16 626 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 KLHL32Q96NJ5 620 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 TRIM54Q9BYV2 358 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 BTBD1Q9H0C5 482 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 VPS33BQ9H267 617 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 PDRG1Q9NUG6 133 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 TRMT112Q9UI30 125 aaKnown RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 AGAP1Q9UPQ3 857 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 CDYLQ9Y232 598 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 USP15Q9Y4E8 981 aaPredicted RBP5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 FPGT-TNNI3KV9GXZ4 949 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 RFX7Q2KHR2 1363 aa5.75□□□□□ -1.49
MTHFD1-206ENST00000554353 ZNF609O15014 1411 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SPEF2Q9C093 1822 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 PABPN1LA6NDY0 278 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 hCG_1984214I3L0E3 225 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 K7ESM1 405 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 BTN3A1O00481 513 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 RHOBTB3O94955 611 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 MBD3O95983 291 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 TGFB3P10600 412 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SYT1P21579 422 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 CHKAP35790 457 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 GMPSP49915 693 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 PTTG1IPP53801 180 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 MAP2K1Q02750 393 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SLC13A2Q13183 592 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 GRM1Q13255 1194 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 ME3Q16798 604 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 C3orf38Q5JPI3 329 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 ARMC3Q5W041 872 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 CST9Q5W186 159 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 MZT2BQ6NZ67 158 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 USP37Q86T82 979 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SESTD1Q86VW0 696 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 ZFPM1Q8IX07 1006 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 PDPRQ8NCN5 879 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SUPT20HQ8NEM7 779 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 ATRIPQ8WXE1 791 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SCAMP4Q969E2 229 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 TRIM63Q969Q1 353 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 MARS2Q96GW9 593 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 CAPNS2Q96L46 248 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 WWC2-AS2Q96NR7 200 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SERINC2Q96SA4 455 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 FSD1Q9BTV5 496 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 ISCA1Q9BUE6 129 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 TLR10Q9BXR5 811 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 TINAGL1Q9GZM7 467 aaPredicted RBP5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 GPR35Q9HC97 309 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 ADARB2Q9NS39 739 aaKnown RBP5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 PGAP2Q9UHJ9 254 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SORCS3Q9UPU3 1222 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 MED16Q9Y2X0 877 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 TCAF1Q9Y4C2 921 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 CYP46A1Q9Y6A2 500 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 AKAP11Q9UKA4 1901 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 LRRC37AA6NMS7 1700 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SH3TC1Q8TE82 1336 aa5.74□□□□□ -1.49
MTHFD1-206ENST00000554353 SCN9AQ15858 1988 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 STX6O43752 255 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 VPS4BO75351 444 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 KIF20AO95235 890 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 CELF2O95319 508 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 GRPP07492 148 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 HNRNPCP07910 306 aaKnown RBP eCLIP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 HSPA8P11142 646 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 FCER1AP12319 257 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 RPL17P18621 184 aaKnown RBP5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 GCSHP23434 173 aa5.73□□□□□ -1.49
MTHFD1-206ENST00000554353 RPS6KB1P23443 525 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms