RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 NUP58Q9BVL2 599 aa17.89■□□□□ 0.45
NEK9-204ENST00000554258 ITPR3Q14573 2671 aa17.89■□□□□ 0.45
NEK9-204ENST00000554258 ARID1BQ8NFD5 2236 aaPredicted RBP17.88■□□□□ 0.45
NEK9-204ENST00000554258 PVALEFA0A1B0GWK0 134 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 WASH3PC4AMC7 463 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 GFRA2O00451 464 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 DFNA5O60443 496 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 CR2P20023 1033 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 CCR10P46092 362 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 DPYDQ12882 1025 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 CUL4BQ13620 913 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 TMEM132DQ14C87 1099 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 CACTIN-AS1Q8N1I8 211 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 SPATA20Q8TB22 786 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 BICD1Q96G01 975 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 CCDC34Q96HJ3 373 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.88■□□□□ 0.45
NEK9-204ENST00000554258 DPH1Q9BZG8 443 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 MKRN2Q9H000 416 aaKnown RBP17.88■□□□□ 0.45
NEK9-204ENST00000554258 PCED1AQ9H1Q7 454 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 TM9SF3Q9HD45 589 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 DNAJC17Q9NVM6 304 aaKnown RBP17.88■□□□□ 0.45
NEK9-204ENST00000554258 GTF3C4Q9UKN8 822 aa17.88■□□□□ 0.45
NEK9-204ENST00000554258 CENPEQ02224 2701 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 ZNF840PA6NDX5 716 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 KLRC4O43908 158 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 OLFM2O95897 454 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 MBL2P11226 248 aaPredicted RBP17.87■□□□□ 0.45
NEK9-204ENST00000554258 PLS3P13797 630 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 ACAT1P24752 427 aaKnown RBP17.87■□□□□ 0.45
NEK9-204ENST00000554258 CTSKP43235 329 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 EHHADHQ08426 723 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 ORC1Q13415 861 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 POSTNQ15063 836 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 INTS6LQ5JSJ4 861 aaKnown RBP17.87■□□□□ 0.45
NEK9-204ENST00000554258 UNC13DQ70J99 1090 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 DYMQ7RTS9 669 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 ADAT2Q7Z6V5 191 aaKnown RBP17.87■□□□□ 0.45
NEK9-204ENST00000554258 CD302Q8IX05 232 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 DCBLD1Q8N8Z6 715 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 FIZ1Q96SL8 496 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 ACBD6Q9BR61 282 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 CLSTN2Q9H4D0 955 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 OSGEPQ9NPF4 335 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 SPHK2Q9NRA0 654 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 KCNG1Q9UIX4 513 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 ICE1Q9Y2F5 2266 aa17.87■□□□□ 0.45
NEK9-204ENST00000554258 A0A1B0GTQ1 180 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 SFI1A8K8P3 1242 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 KPNA7A9QM74 516 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 PRRT4C9JH25 899 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 KRT18P05783 430 aaKnown RBP17.86■□□□□ 0.45
NEK9-204ENST00000554258 ITGAVP06756 1048 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 ADRB2P07550 413 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 PRR29P0C7W0 189 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 ACADMP11310 421 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 GAP43P17677 238 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 ABCB4P21439 1286 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 CASP1P29466 404 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 MYL7Q01449 175 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 RAD51AP2Q09MP3 1159 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 ILKQ13418 452 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 SV2CQ496J9 727 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 KCNT1Q5JUK3 1230 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 KDM7AQ6ZMT4 941 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 FAM124AQ86V42 546 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 TMEM25Q86YD3 366 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 PRCCQ92733 491 aaPredicted RBP17.86■□□□□ 0.45
NEK9-204ENST00000554258 SIPA1Q96FS4 1042 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 BLZF1Q9H2G9 400 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 PARVGQ9HBI0 331 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 DDX43Q9NXZ2 648 aaKnown RBP17.86■□□□□ 0.45
NEK9-204ENST00000554258 SEL1LQ9UBV2 794 aa17.86■□□□□ 0.45
NEK9-204ENST00000554258 K7ENP7 123 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 SUV39H1O43463 412 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 OAS1P00973 400 aaKnown RBP17.85■□□□□ 0.45
NEK9-204ENST00000554258 MAPTP10636 758 aaKnown RBP17.85■□□□□ 0.45
NEK9-204ENST00000554258 FBN2P35556 2912 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 PPP3CCP48454 512 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 USP46P62068 366 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 CCDC142Q17RM4 750 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 INO80CQ6PI98 192 aaPredicted RBP17.85■□□□□ 0.45
NEK9-204ENST00000554258 CACUL1Q86Y37 369 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 TMPRSS6Q8IU80 811 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 CCDC65Q8IXS2 484 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 LSMEM2Q8N112 164 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 EID2Q8N6I1 236 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 EXD3Q8N9H8 876 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 FUBP3Q96I24 572 aaKnown RBP eCLIP17.85■□□□□ 0.45
NEK9-204ENST00000554258 PKMYT1Q99640 499 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 ST6GALNAC4Q9H4F1 302 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 OLFML3Q9NRN5 406 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 PANK4Q9NVE7 773 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 LARSQ9P2J5 1176 aaKnown RBP17.85■□□□□ 0.45
NEK9-204ENST00000554258 HOOK1Q9UJC3 728 aaKnown RBP17.85■□□□□ 0.45
NEK9-204ENST00000554258 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.85■□□□□ 0.45
NEK9-204ENST00000554258 DERAQ9Y315 318 aa17.85■□□□□ 0.45
NEK9-204ENST00000554258 SH3BP1Q9Y3L3 701 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms