RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 AP4S1Q9Y587 144 aa9.87□□□□□ -0.83
SIX4-202ENST00000554079 CDK5RAP2Q96SN8 1893 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 ARHGEF37A1IGU5 675 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 GTPBP10A4D1E9 387 aaKnown RBP9.86□□□□□ -0.83
SIX4-202ENST00000554079 ENPP3O14638 875 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 LPXNO60711 386 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 LRRN2O75325 713 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 NR2F2P24468 414 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 L1CAMP32004 1257 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 GPX6P59796 221 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 PHC1P78364 1004 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 MRPS9P82933 396 aaKnown RBP9.86□□□□□ -0.83
SIX4-202ENST00000554079 GALNT1Q10472 559 aaPredicted RBP9.86□□□□□ -0.83
SIX4-202ENST00000554079 LLGL1Q15334 1064 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 C1orf141Q5JVX7 400 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 GPR107Q5VW38 600 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 POTEAQ6S8J7 498 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 GLRX5Q86SX6 157 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 ZBTB46Q86UZ6 589 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 ZNF354CQ86Y25 554 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 DCLK2Q8N568 766 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 MAGEB6Q8N7X4 407 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 LILRB1Q8NHL6 650 aaPredicted RBP9.86□□□□□ -0.83
SIX4-202ENST00000554079 CABLES1Q8TDN4 633 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 DCAKDQ8WVC6 231 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 NACC1Q96RE7 527 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 EBF4Q9BQW3 602 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 C1orf50Q9BV19 199 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 CALN1Q9BXU9 219 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 NYXQ9GZU5 481 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 RMND5AQ9H871 391 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 SLC38A10Q9HBR0 1119 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 GDAP2Q9NXN4 497 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 TMEM9Q9P0T7 183 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 KLQ9UEF7 1012 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 NIP7Q9Y221 180 aaKnown RBP eCLIP9.86□□□□□ -0.83
SIX4-202ENST00000554079 CLUHO75153 1309 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 MYO3BQ8WXR4 1341 aa9.86□□□□□ -0.83
SIX4-202ENST00000554079 FAM155AB1AL88 458 aaPredicted RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 CCRL2O00421 344 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PLOD2O00469 737 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ENTPD3O75355 529 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 CLPXO76031 633 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 CCDC159P0C7I6 412 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PTPN1P18031 435 aaKnown RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 KCNA4P22459 653 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 GRK2P25098 689 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 TTKP33981 857 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 NLRP6P59044 892 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 MRPS22P82650 360 aaKnown RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 SLC18A2Q05940 514 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 NIPAL4Q0D2K0 466 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 BST1Q10588 318 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 DRAP1Q14919 205 aaPredicted RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 STILQ15468 1287 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 UBE2SQ16763 222 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PERM1Q5SV97 790 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ZNF790Q6PG37 636 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 SH2D5Q6ZV89 423 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ETNPPLQ8TBG4 499 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 SLC5A5Q92911 643 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 RMDN1Q96DB5 314 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 FEM1CQ96JP0 617 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ACAP3Q96P50 834 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PSKH2Q96QS6 385 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 KCNK16Q96T55 309 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 OSBPL11Q9BXB4 747 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 RUBCNLQ9H714 662 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ZNF304Q9HCX3 659 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ST14Q9Y5Y6 855 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 IKBKGQ9Y6K9 419 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 C1orf232A0A0U1RR37 186 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 I3L4J1 428 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 DNALI1O14645 258 aaPredicted RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 TNPO2O14787 897 aaKnown RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 ATP2A1O14983 1001 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ACOX3O15254 700 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 CYP1A2P05177 515 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 XRCC5P13010 732 aaKnown RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 ZNF182P17025 639 aaPredicted RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 GPC5P78333 572 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 IFITM3Q01628 133 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 CENPCQ03188 943 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 GRSF1Q12849 480 aaKnown RBP eCLIP9.85□□□□□ -0.83
SIX4-202ENST00000554079 TRAF2Q12933 501 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PMS2P3Q13401 168 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 RAB39AQ14964 217 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ABCB5Q2M3G0 1257 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 MGAT5BQ3V5L5 792 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 FAM47CQ5HY64 1035 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 MAMSTRQ6ZN01 415 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 HAUS6Q7Z4H7 955 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ZC3H7AQ8IWR0 971 aaKnown RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 PDPRQ8NCN5 879 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 TFB1MQ8WVM0 346 aaKnown RBP9.85□□□□□ -0.83
SIX4-202ENST00000554079 SLC35C1Q96A29 364 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 PGBD4Q96DM1 585 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 BTBD6Q96KE9 485 aa9.85□□□□□ -0.83
SIX4-202ENST00000554079 ZNF347Q96SE7 839 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms