RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 DMP1Q13316 513 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-224ENST00000554040 CALCRLQ16602 461 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 SLC10A6Q3KNW5 377 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 MGAT5BQ3V5L5 792 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 EARS2Q5JPH6 523 aaKnown RBP7.4□□□□□ -1.22
ATXN3-224ENST00000554040 OVOS1Q6IE37 1185 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 DSTYKQ6XUX3 929 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 ZNF574Q6ZN55 896 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-224ENST00000554040 CATSPER3Q86XQ3 398 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 NAXDQ8IW45 347 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 DEFB119Q8N690 84 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 MRPS31Q92665 395 aaKnown RBP7.4□□□□□ -1.22
ATXN3-224ENST00000554040 KCNB2Q92953 911 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 LINC00597Q9H2U6 94 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 PRORYQ9H606 182 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 POLD4Q9HCU8 107 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 TUBGCP4Q9UGJ1 667 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 TRIP11Q15643 1979 aa7.4□□□□□ -1.23
ATXN3-224ENST00000554040 SHROOM3Q8TF72 1996 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 A0A1W2PQD8 194 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 SGK1O00141 431 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 ABLIM1O14639 778 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 CPLX1O14810 134 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 GADD45BO75293 160 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 HAPLN1P10915 354 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 CYP3A5P20815 502 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 RPS6KB1P23443 525 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 NMT1P30419 496 aaKnown RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 OPRD1P41143 372 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 IFNAR2P48551 515 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 RPL6Q02878 288 aaKnown RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 SMARCB1Q12824 385 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 CDK5R2Q13319 367 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 ZBTB6Q15916 424 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 ZNF77Q15935 545 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 HSF5Q4G112 596 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 SLC39A12Q504Y0 691 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 OGFOD2Q6N063 350 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 BLOC1S2Q6QNY1 142 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 SLC36A4Q6YBV0 504 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 EFCAB13Q8IY85 973 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 IL17RCQ8NAC3 791 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 TXNDC5Q8NBS9 432 aaKnown RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 OR10T2Q8NGX3 314 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 PIP4K2CQ8TBX8 421 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 STK35Q8TDR2 534 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 HMGB4Q8WW32 186 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 KIFAP3Q92845 792 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 JAKMIP1Q96N16 626 aaKnown RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 MTMR9Q96QG7 549 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 KIF2CQ99661 725 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 TCHPQ9BT92 498 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 TARS2Q9BW92 718 aaKnown RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 MRPL4Q9BYD3 311 aaKnown RBP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 ZCWPW1Q9H0M4 648 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 PLEKHA5Q9HAU0 1116 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 TUFT1Q9NNX1 390 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 BCCIPQ9P287 314 aaKnown RBP eCLIP7.39□□□□□ -1.23
ATXN3-224ENST00000554040 PCOLCE2Q9UKZ9 415 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 WNT6Q9Y6F9 365 aa7.39□□□□□ -1.23
ATXN3-224ENST00000554040 ARID1BQ8NFD5 2236 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-224ENST00000554040 ARHGEF35A5YM69 484 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 CAPN8A6NHC0 703 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 CAPN9O14815 690 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 ARHGAP6O43182 974 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 MED24O75448 989 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 KLF8O95600 359 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-224ENST00000554040 NFATC1O95644 943 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 GSTP1P09211 210 aaKnown RBP7.38□□□□□ -1.23
ATXN3-224ENST00000554040 ITPKBP27987 946 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 CDR1P51861 262 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 LILRA4P59901 499 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 PLEKHG6Q3KR16 790 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 EOGTQ5NDL2 527 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 MPZL3Q6UWV2 235 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 MARCH9Q86YJ5 346 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 GALNT15Q8N3T1 639 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 ALLCQ8N6M5 410 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 AGBL5Q8NDL9 886 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 SPPL2BQ8TCT7 592 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 SETD7Q8WTS6 366 aaKnown RBP7.38□□□□□ -1.23
ATXN3-224ENST00000554040 C2orf15Q8WU43 125 aaKnown RBP7.38□□□□□ -1.23
ATXN3-224ENST00000554040 ZBTB45Q96K62 511 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-224ENST00000554040 SENP8Q96LD8 212 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 CYP2S1Q96SQ9 504 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 ZDHHC5Q9C0B5 715 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 KRT82Q9NSB4 513 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 UBQLN1Q9UMX0 589 aaKnown RBP7.38□□□□□ -1.23
ATXN3-224ENST00000554040 MGAQ8IWI9 3026 aa7.38□□□□□ -1.23
ATXN3-224ENST00000554040 PIEZO2Q9H5I5 2752 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 MYO18AQ92614 2054 aaKnown RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 NBPF19A0A087WUL8 3843 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 NUP210Q8TEM1 1887 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 KIF26AQ9ULI4 1882 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 PHLPP2Q6ZVD8 1323 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 TCRBV21S2A2A0A5A6 115 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 MYMKA6NI61 221 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 CCDC169A6NNP5 214 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms