RNA–Protein interactions for RNA: ENST00000553930.5

SDR39U1-206, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 5 BASIC

Gene SDR39U1, Length 1,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-206ENST00000553930 PDE4CQ08493 712 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 BST2Q10589 180 aaKnown RBP18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 MAP7D1Q3KQU3 841 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 PM20D1Q6GTS8 502 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 SDE2Q6IQ49 451 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 CHPFQ8IZ52 775 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 UBR7Q8N806 425 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 EDEM2Q9BV94 578 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 PLK2Q9NYY3 685 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 MARCH2Q9P0N8 246 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 MBD1Q9UIS9 605 aaPredicted RBP18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 FBXO10Q9UK96 956 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 KIAA1257Q9ULG3 409 aa18.4■□□□□ 0.54
SDR39U1-206ENST00000553930 A0A1W2PQF6 199 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 LNP1A1A4G5 178 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 TULP2O00295 520 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 KHNYNO15037 678 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 PMM2O15305 246 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 PENKP01210 267 aaPredicted RBP18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 VDRP11473 427 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 GABRG2P18507 467 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 WASP42768 502 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 LRMPQ12912 555 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 CCDC40Q4G0X9 1142 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 SPDYCQ5MJ68 293 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 BHLHA9Q7RTU4 235 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 FRMD1Q8N878 549 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 ACOX2Q99424 681 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 ULBP1Q9BZM6 244 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 LRRC4Q9HBW1 653 aa18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 AGO1Q9UL18 857 aaKnown RBP18.39■□□□□ 0.53
SDR39U1-206ENST00000553930 SPTBN2O15020 2390 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 SLC12A8A0AV02 714 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 O00370 1275 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 ZBTB24O43167 697 aaPredicted RBP18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 FYB2Q5VWT5 728 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 TTI2Q6NXR4 508 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 FOXR2Q6PJQ5 311 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 DENND1CQ8IV53 801 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 TMEFF1Q8IYR6 380 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 PIGKQ92643 395 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 P2RY11Q96G91 374 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 NT5C1BQ96P26 610 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 IPO9Q96P70 1041 aaKnown RBP18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 GABRG3Q99928 467 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 CD248Q9HCU0 757 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 OLA1Q9NTK5 396 aaKnown RBP18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 CALCOCO1Q9P1Z2 691 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 SLC27A6Q9Y2P4 619 aa18.38■□□□□ 0.53
SDR39U1-206ENST00000553930 BICDL2A1A5D9 508 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 PPP1R3GB7ZBB8 358 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 GFRA2O00451 464 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 PAEPP09466 180 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 SETSIPP0DME0 302 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 BMP6P22004 513 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 KCNA4P22459 653 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 ADIGQ0VDE8 80 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 CETN1Q12798 172 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 KLHL10Q6JEL2 608 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 TMEM270Q6UE05 265 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 UBA3Q8TBC4 463 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 IPO4Q8TEX9 1081 aaKnown RBP18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 NELFBQ8WX92 580 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 KCTD13Q8WZ19 329 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 NDRG1Q92597 394 aaKnown RBP18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 PLD4Q96BZ4 506 aa18.37■□□□□ 0.53
SDR39U1-206ENST00000553930 C4orf47A7E2U8 309 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 PATE3B3GLJ2 98 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 P4HA2O15460 535 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 CYBBP04839 570 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 DPP6P42658 865 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 PTGER3P43115 390 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 MORC3Q14149 939 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 PKDCCQ504Y2 493 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 KIAA1211LQ6NV74 962 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 LCLAT1Q6UWP7 414 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 SLC36A4Q6YBV0 504 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 SYT12Q8IV01 421 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 SIX6OS1Q8N1H7 587 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 SCML4Q8N228 414 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 PPM1KQ8N3J5 372 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 CPXM2Q8N436 756 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 CNGB3Q9NQW8 809 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 CACNA2D2Q9NY47 1150 aa18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 EVLQ9UI08 416 aaPredicted RBP18.36■□□□□ 0.53
SDR39U1-206ENST00000553930 AP5Z1O43299 807 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 ZNF217O75362 1048 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 NDUFV2P19404 249 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 HARS2P49590 506 aaKnown RBP18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 MFAP3P55082 362 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 IRX4P78413 519 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 TRIP4Q15650 581 aaPredicted RBP18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 BSPRYQ5W0U4 402 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 LYSMD4Q5XG99 296 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 ARMCX6Q7L4S7 300 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 FMNL3Q8IVF7 1028 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 FAM217AQ8IXS0 508 aa18.35■□□□□ 0.53
SDR39U1-206ENST00000553930 LMO3Q8TAP4 145 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms