RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 OAZ2O95190 189 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 CYP19A1P11511 503 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-210ENST00000553693 YY1P25490 414 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 GALNSP34059 522 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 ME1P48163 572 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 WDR5P61964 334 aaKnown RBP4.7□□□□□ -1.66
SCFD1-210ENST00000553693 GPS1Q13098 491 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 STIM1Q13586 685 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 DNASE1L3Q13609 305 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 RAPGEF1Q13905 1077 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 GALEQ14376 348 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 ACOX1Q15067 660 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 USP17L6PQ6QN14 398 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 ZNF793Q6ZN11 406 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 IRF2BP2Q7Z5L9 587 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 SUN3Q8TAQ9 357 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 ABHD5Q8WTS1 349 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 TSR2Q969E8 191 aaKnown RBP4.7□□□□□ -1.66
SCFD1-210ENST00000553693 ZFYVE19Q96K21 471 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 EBF3Q9H4W6 596 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 ZBTB26Q9HCK0 441 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 VPS45Q9NRW7 570 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 CORO2BQ9UQ03 480 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 HS3ST3B1Q9Y662 390 aa4.7□□□□□ -1.66
SCFD1-210ENST00000553693 CLCA1A8K7I4 914 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 RHPN2P1A8MT19 583 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 TULP3O75386 442 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 PLAUP00749 431 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 SLC3A2P08195 630 aaKnown RBP4.69□□□□□ -1.66
SCFD1-210ENST00000553693 CPA2P48052 419 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 RAE1P78406 368 aaKnown RBP4.69□□□□□ -1.66
SCFD1-210ENST00000553693 MTAPQ13126 283 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 CNGA3Q16281 694 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 AASDHQ4L235 1098 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-210ENST00000553693 FAXCQ5TGI0 409 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 CYB5RLQ6IPT4 315 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 GRHL2Q6ISB3 625 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 PIP4P1Q86T03 277 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 WDR75Q8IWA0 830 aaKnown RBP4.69□□□□□ -1.66
SCFD1-210ENST00000553693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.69□□□□□ -1.662e-7■■■■□ 19.9
SCFD1-210ENST00000553693 APOL5Q9BWW9 433 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 TMOD4Q9NZQ9 345 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 SEMA5BQ9P283 1151 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 HEY2Q9UBP5 337 aa4.69□□□□□ -1.66
SCFD1-210ENST00000553693 TTC34A8MYJ7 566 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 IDEP14735 1019 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 SLC5A2P31639 672 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 ATICP31939 592 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 SLC12A2P55011 1212 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 C14orf80Q86SX3 495 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 PIM3Q86V86 326 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 DGKHQ86XP1 1220 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 SAMD14Q8IZD0 417 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-210ENST00000553693 BCAS4Q8TDM0 211 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 FCRL5Q96RD9 977 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 WDR24Q96S15 920 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 MAGEB5Q9BZ81 275 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 SAP30LQ9HAJ7 183 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 ABHD10Q9NUJ1 306 aa4.68□□□□□ -1.66
SCFD1-210ENST00000553693 SIRT4Q9Y6E7 314 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-210ENST00000553693 C2CD4BA6NLJ0 364 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 H3BNX3 289 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 AREL1O15033 823 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 PQBP1O60828 265 aaKnown RBP4.67□□□□□ -1.66
SCFD1-210ENST00000553693 COQ9O75208 318 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 MBPP02686 304 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-210ENST00000553693 PSG1P11464 419 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 MYL4P12829 197 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 MATN1P21941 496 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 KRTAP5-9P26371 169 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 DUSP1P28562 367 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 LINC00205P59089 165 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 KCNJ12Q14500 433 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 RRAGBQ5VZM2 374 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 ABLIM2Q6H8Q1 611 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 MRNIPQ6NTE8 343 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 BEND5Q7L4P6 421 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 ZDHHC17Q8IUH5 632 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 UEVLDQ8IX04 471 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 ATP11CQ8NB49 1132 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 CCDC150Q8NCX0 1101 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 PIGKQ92643 395 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 SENP7Q9BQF6 1050 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 TM2D2Q9BX73 214 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 DDX21Q9NR30 783 aaKnown RBP eCLIP4.67□□□□□ -1.66
SCFD1-210ENST00000553693 SQORQ9Y6N5 450 aa4.67□□□□□ -1.66
SCFD1-210ENST00000553693 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-210ENST00000553693 RRHO14718 337 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 DRD1P21728 446 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 MMP8P22894 467 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 RPS6KB1P23443 525 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 TKTP29401 623 aaKnown RBP4.66□□□□□ -1.66
SCFD1-210ENST00000553693 PBX1P40424 430 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 B4GALNT1Q00973 533 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 MTX1Q13505 466 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 CRTC1Q6UUV9 634 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 FAM57BQ71RH2 274 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 CCDC33Q8N5R6 958 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 OVCA2Q8WZ82 227 aa4.66□□□□□ -1.66
SCFD1-210ENST00000553693 TIFAQ96CG3 184 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms