RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 LHX1P48742 406 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 ARHGAP44Q17R89 818 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 CFAP221Q4G0U5 840 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 PLA2G2CQ5R387 149 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 SCARA3Q6AZY7 606 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 SV2AQ7L0J3 742 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 CPA6Q8N4T0 437 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 SLC30A5Q8TAD4 765 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 OSCP1Q8WVF1 389 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 TSC1Q92574 1164 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 CYP2S1Q96SQ9 504 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 CGRRF1Q99675 332 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 PDCL3Q9H2J4 239 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 RXFP3Q9NSD7 469 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 POLR3BQ9NW08 1133 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-209ENST00000553659 DUS2Q9NX74 493 aaKnown RBP16.84■□□□□ 0.29
ACTN1-209ENST00000553659 RBAKQ9NYW8 714 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-209ENST00000553659 ITGA11Q9UKX5 1188 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 SNX9Q9Y5X1 595 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 THADAQ6YHU6 1953 aa16.84■□□□□ 0.29
ACTN1-209ENST00000553659 KMT2BQ9UMN6 2715 aaPredicted RBP16.83■□□□□ 0.29
ACTN1-209ENST00000553659 TRAV19A0A0A6YYK7 116 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.28
ACTN1-209ENST00000553659 CES2O00748 559 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 GABRDO14764 452 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 PCSK1P29120 753 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 RBP5P82980 135 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 ZNF77Q15935 545 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 ST3GAL2Q16842 350 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 TEX35Q5T0J7 233 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 CCDC70Q6NSX1 233 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 SYT13Q7L8C5 426 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 OSTM1Q86WC4 334 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 SPATA2LQ8IUW3 424 aaPredicted RBP16.83■□□□□ 0.28
ACTN1-209ENST00000553659 FAM71AQ8IYT1 594 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 TOP6BLQ8N6T0 577 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 RPLP0P6Q8NHW5 317 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 SHC3Q92529 594 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 CD101Q93033 1021 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 FUBP3Q96I24 572 aaKnown RBP eCLIP16.83■□□□□ 0.28
ACTN1-209ENST00000553659 SLC22A12Q96S37 553 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 AGPAT1Q99943 283 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 SYT11Q9BT88 431 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 TRPC7Q9HCX4 862 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 CAPN6Q9Y6Q1 641 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 DUSP10Q9Y6W6 482 aa16.83■□□□□ 0.28
ACTN1-209ENST00000553659 ABCA7Q8IZY2 2146 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 EPG5Q9HCE0 2579 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 CKMP06732 381 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 KRT19P08727 400 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 DLATP10515 647 aaKnown RBP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 H2AFXP16104 143 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 KCNA4P22459 653 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 MPLP40238 635 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 PAFAH1B1P43034 410 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 IFNAR2P48551 515 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 BPIFB4P59827 614 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 SOWAHAQ2M3V2 549 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 ZACNQ401N2 412 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 PLK5Q496M5 336 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 STPG1Q5TH74 334 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 NAIF1Q69YI7 327 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 PPP1R2P3Q6NXS1 205 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 FAM171BQ6P995 826 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 ZNF572Q7Z3I7 529 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 ARHGEF19Q8IW93 802 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 ADGRF2Q8IZF7 708 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 PPM1KQ8N3J5 372 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 ARL14EPQ8N8R7 260 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 CTNNBL1Q8WYA6 563 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 ATP2A3Q93084 1043 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 HHIPQ96QV1 700 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 PDE11AQ9HCR9 933 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 VPS45Q9NRW7 570 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 EBF1Q9UH73 591 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 SIX4Q9UIU6 781 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 TFR2Q9UP52 801 aa16.82■□□□□ 0.28
ACTN1-209ENST00000553659 V9GYY5 206 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-209ENST00000553659 MAP1BP46821 2468 aaKnown RBP16.81■□□□□ 0.28
ACTN1-209ENST00000553659 FOXN3O00409 490 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-209ENST00000553659 ENC1O14682 589 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 GZMAP12544 262 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 TCF3P15923 654 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 TNNI1P19237 187 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 TBXAS1P24557 533 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-209ENST00000553659 MAGEA11P43364 429 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 PDE6CP51160 858 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 USP4Q13107 963 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 NR1H3Q13133 447 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 DMC1Q14565 340 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 BRD3Q15059 726 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 TCEAL1Q15170 157 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 EML3Q32P44 896 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 N4BP2L1Q5TBK1 243 aaPredicted RBP16.81■□□□□ 0.28
ACTN1-209ENST00000553659 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 ZNF677Q86XU0 584 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 WDR49Q8IV35 697 aa16.81■□□□□ 0.28
ACTN1-209ENST00000553659 SCN4BQ8IWT1 228 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms