RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 MAB21L3Q8N8X9 362 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 PPM1EQ8WY54 764 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 MYLIPQ8WY64 445 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 ZNF707Q96C28 371 aaPredicted RBP10.18□□□□□ -0.78
CHD8-204ENST00000553622 TCEAL4Q96EI5 215 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 CDK5RAP1Q96SZ6 601 aaKnown RBP10.18□□□□□ -0.78
CHD8-204ENST00000553622 PSMB7Q99436 277 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 NPY6RQ99463 290 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 NAPGQ99747 312 aaPredicted RBP10.18□□□□□ -0.78
CHD8-204ENST00000553622 SMOC2Q9H3U7 446 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 IL21Q9HBE4 155 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 KLHL11Q9NVR0 708 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHD8-204ENST00000553622 SMPD4Q9NXE4 827 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 RRN3Q9NYV6 651 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 CLIC5Q9NZA1 410 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.18□□□□□ -0.78
CHD8-204ENST00000553622 DNMT3LQ9UJW3 386 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 MRPS23Q9Y3D9 190 aaKnown RBP10.18□□□□□ -0.78
CHD8-204ENST00000553622 LAMA3Q16787 3333 aa10.18□□□□□ -0.78
CHD8-204ENST00000553622 NUP205Q92621 2012 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 SHROOM3Q8TF72 1996 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 DENND4AQ7Z401 1863 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 TRAV19A0A0A6YYK7 116 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ZNF197O14709 1029 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 COCHO43405 550 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ZNF500O60304 480 aaPredicted RBP10.17□□□□□ -0.78
CHD8-204ENST00000553622 LRCH4O75427 683 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ATP1A1P05023 1023 aaKnown RBP10.17□□□□□ -0.78
CHD8-204ENST00000553622 CKMP06732 381 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ZDHHC11BP0C7U3 371 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 IRF1P10914 325 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 TCF4P15884 667 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 HDAC4P56524 1084 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ADAM15Q13444 863 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 KCNC3Q14003 757 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ACAP1Q15027 740 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 SMTNL2Q2TAL5 461 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 STXBP5Q5T5C0 1151 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 OTUD1Q5VV17 481 aaPredicted RBP10.17□□□□□ -0.78
CHD8-204ENST00000553622 CES5AQ6NT32 575 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 MSANTD2Q6P1R3 559 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 BEND5Q7L4P6 421 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 STRADAQ7RTN6 431 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 SLFN11Q7Z7L1 901 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 TMEM150AQ86TG1 271 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 RHOT1Q8IXI2 618 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 UBL4BQ8N7F7 174 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ARL14EPQ8N8R7 260 aaPredicted RBP10.17□□□□□ -0.78
CHD8-204ENST00000553622 LEMD2Q8NC56 503 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 SHKBP1Q8TBC3 707 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 HSPH1Q92598 858 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ACSF2Q96CM8 615 aaPredicted RBP10.17□□□□□ -0.78
CHD8-204ENST00000553622 SERPINB11Q96P15 392 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 LRRC3Q9BY71 257 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 ADAM33Q9BZ11 813 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 PIGVQ9NUD9 493 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 GPATCH2LQ9NWQ4 482 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 CDH22Q9UJ99 828 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 USP18Q9UMW8 372 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHD8-204ENST00000553622 JRKLQ9Y4A0 524 aa10.17□□□□□ -0.78
CHD8-204ENST00000553622 IRAK2O43187 625 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 TBX10O75333 385 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 MOCS2O96007 188 aaPredicted RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 F9P00740 461 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 APOEP02649 317 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 KRT1P04264 644 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 FOSL2P15408 326 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 HOXB8P17481 243 aaPredicted RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 CEBPBP17676 345 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 HDCP19113 662 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 FSHRP23945 695 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 PCK1P35558 622 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 CCR2P41597 374 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 MARCKSL1P49006 195 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 TUBP50607 506 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 TBX4P57082 545 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 KRT81Q14533 505 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 SLC5A9Q2M3M2 681 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 ZC3H12AQ5D1E8 599 aaKnown RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 HABP4Q5JVS0 413 aaKnown RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 MEI1Q5TIA1 1274 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 SNX30Q5VWJ9 437 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 SYCE2Q6PIF2 218 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 TMEM184AQ6ZMB5 413 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 GET4Q7L5D6 327 aaPredicted RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 CCDC50Q8IVM0 306 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 DEFB123Q8N688 67 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 ARFGAP1Q8N6T3 406 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 CCDC185Q8N715 623 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 CMASQ8NFW8 434 aaPredicted RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 KRT35Q92764 455 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 PEBP4Q96S96 227 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 CYP2S1Q96SQ9 504 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 CDX2Q99626 313 aaPredicted RBP10.16□□□□□ -0.78
CHD8-204ENST00000553622 NCAPGQ9BPX3 1015 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 WDCPQ9H6R7 721 aa10.16□□□□□ -0.78
CHD8-204ENST00000553622 CALCOCO1Q9P1Z2 691 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms