RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 OTOP2Q7RTS6 562 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 DEFB128Q7Z7B8 93 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 UBE2Q1Q7Z7E8 422 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 NSUN7Q8NE18 718 aaKnown RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 SEPT1Q8WYJ6 367 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 GJA10Q969M2 543 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 DYDC2Q96IM9 177 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 HIST1H2AHQ96KK5 128 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 HIST1H2AJQ99878 128 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 AZI2Q9H6S1 392 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 AGO4Q9HCK5 861 aaKnown RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 ANLNQ9NQW6 1124 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 TRMT13Q9NUP7 481 aaKnown RBP5.23□□□□□ -1.57
ATXN3-222ENST00000553570 HDAC6Q9UBN7 1215 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 GABBR1Q9UBS5 961 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 SLC9A2Q9UBY0 812 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 FBXO10Q9UK96 956 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 CDC42EP3Q9UKI2 254 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 UBIAD1Q9Y5Z9 338 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 ARID2Q68CP9 1835 aa5.23□□□□□ -1.57
ATXN3-222ENST00000553570 NLRC5Q86WI3 1866 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 DNAH12Q6ZR08 3092 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 A0A0G2JNJ9 132 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 GSTTP1A0A1W2PQM5 241 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ESYT2A0FGR8 921 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 C17orf102A2RUQ5 167 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TRIM43BA6NCK2 446 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 FAM86B1E9PN63 330 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 IPO5O00410 1097 aaKnown RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 SEC24DO94855 1032 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TIMP1P01033 207 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 LGALS2P05162 132 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 FAM86B2P0C5J1 330 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 CST5P28325 142 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 GJB2P29033 226 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ICAM3P32942 547 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 SREBF1P36956 1147 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 MCM2P49736 904 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 CDK7P50613 346 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 STAT5BP51692 787 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ACTR2P61160 394 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 GHRHRQ02643 423 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 FPGSQ05932 587 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 DUSP8Q13202 625 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 NFYCQ13952 458 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ZXDCQ2QGD7 858 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ANO4Q32M45 955 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 LRCH2Q5VUJ6 765 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 FAM160B1Q5W0V3 765 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 MIS18BP1Q6P0N0 1132 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 METTL7BQ6UX53 244 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 CIR1Q86X95 450 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TMEM199Q8N511 208 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 PPTC7Q8NI37 304 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 PPP1R14CQ8TAE6 165 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 Q8TCH9 128 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 CFHR4Q92496 578 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ATP6V0A1Q93050 837 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TRIM43Q96BQ3 446 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 NEIL1Q96FI4 390 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TMX3Q96JJ7 454 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 LRGUKQ96M69 825 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 GNRHR2Q96P88 292 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 INPP4AQ96PE3 977 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 GPR20Q99678 358 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 LLPHQ9BRT6 129 aaKnown RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 KATNAL1Q9BW62 490 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TEKT3Q9BXF9 490 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 HIPK3Q9H422 1215 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 RNPEPQ9H4A4 650 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 SMARCAD1Q9H4L7 1026 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TBC1D22BQ9NU19 505 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 SETD4Q9NVD3 440 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 POLR3BQ9NW08 1133 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 SAE1Q9UBE0 346 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 Q9UFV3 132 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 DDX25Q9UHL0 483 aaKnown RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 SCOCQ9UIL1 159 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ZNF215Q9UL58 517 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 MYRFQ9Y2G1 1151 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 KIF3AQ9Y496 699 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-222ENST00000553570 MICAL3Q7RTP6 2002 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 STK36Q9NRP7 1315 aa5.22□□□□□ -1.57
ATXN3-222ENST00000553570 TDRD15B5MCY1 1934 aaKnown RBP5.21□□□□□ -1.57
ATXN3-222ENST00000553570 PTPRSQ13332 1948 aa5.21□□□□□ -1.57
ATXN3-222ENST00000553570 NID2Q14112 1375 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 VPS37CA5D8V6 355 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-222ENST00000553570 GOLGA6CA6NDK9 693 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 GOLGA6BA6NDN3 693 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 MSH4O15457 936 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 FOXS1O43638 330 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 TDP2O95551 362 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 FGBP02675 491 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 MMP1P03956 469 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 CYP3A4P08684 503 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 GOLGA6DP0CG33 693 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 SMIM10L2AP0DMW4 78 aa5.21□□□□□ -1.58
ATXN3-222ENST00000553570 SMIM10L2BP0DMW5 78 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms